Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33346 | 100261;100262;100263 | chr2:178537073;178537072;178537071 | chr2:179401800;179401799;179401798 |
N2AB | 31705 | 95338;95339;95340 | chr2:178537073;178537072;178537071 | chr2:179401800;179401799;179401798 |
N2A | 30778 | 92557;92558;92559 | chr2:178537073;178537072;178537071 | chr2:179401800;179401799;179401798 |
N2B | 24281 | 73066;73067;73068 | chr2:178537073;178537072;178537071 | chr2:179401800;179401799;179401798 |
Novex-1 | 24406 | 73441;73442;73443 | chr2:178537073;178537072;178537071 | chr2:179401800;179401799;179401798 |
Novex-2 | 24473 | 73642;73643;73644 | chr2:178537073;178537072;178537071 | chr2:179401800;179401799;179401798 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1436237460 | -1.444 | 0.949 | N | 0.559 | 0.254 | 0.386071988338 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
I/F | rs1436237460 | -1.444 | 0.949 | N | 0.559 | 0.254 | 0.386071988338 | gnomAD-4.0.0 | 1.59283E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86017E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.7573 | likely_pathogenic | 0.7603 | pathogenic | -2.038 | Highly Destabilizing | 0.415 | N | 0.521 | neutral | None | None | None | None | N |
I/C | 0.9035 | likely_pathogenic | 0.892 | pathogenic | -1.509 | Destabilizing | 0.996 | D | 0.607 | neutral | None | None | None | None | N |
I/D | 0.9845 | likely_pathogenic | 0.9863 | pathogenic | -1.442 | Destabilizing | 0.923 | D | 0.712 | prob.delet. | None | None | None | None | N |
I/E | 0.9669 | likely_pathogenic | 0.9711 | pathogenic | -1.294 | Destabilizing | 0.923 | D | 0.703 | prob.neutral | None | None | None | None | N |
I/F | 0.7018 | likely_pathogenic | 0.6701 | pathogenic | -1.249 | Destabilizing | 0.949 | D | 0.559 | neutral | N | 0.502818703 | None | None | N |
I/G | 0.9717 | likely_pathogenic | 0.9705 | pathogenic | -2.506 | Highly Destabilizing | 0.923 | D | 0.673 | neutral | None | None | None | None | N |
I/H | 0.9698 | likely_pathogenic | 0.9703 | pathogenic | -1.809 | Destabilizing | 0.996 | D | 0.728 | prob.delet. | None | None | None | None | N |
I/K | 0.9538 | likely_pathogenic | 0.9499 | pathogenic | -1.267 | Destabilizing | 0.923 | D | 0.711 | prob.delet. | None | None | None | None | N |
I/L | 0.3383 | likely_benign | 0.3098 | benign | -0.745 | Destabilizing | 0.19 | N | 0.326 | neutral | N | 0.452312525 | None | None | N |
I/M | 0.3504 | ambiguous | 0.3323 | benign | -0.798 | Destabilizing | 0.949 | D | 0.536 | neutral | N | 0.465835376 | None | None | N |
I/N | 0.8383 | likely_pathogenic | 0.8312 | pathogenic | -1.366 | Destabilizing | 0.901 | D | 0.736 | prob.delet. | N | 0.491484202 | None | None | N |
I/P | 0.9663 | likely_pathogenic | 0.9666 | pathogenic | -1.15 | Destabilizing | 0.961 | D | 0.731 | prob.delet. | None | None | None | None | N |
I/Q | 0.9384 | likely_pathogenic | 0.9417 | pathogenic | -1.335 | Destabilizing | 0.961 | D | 0.739 | prob.delet. | None | None | None | None | N |
I/R | 0.9353 | likely_pathogenic | 0.9332 | pathogenic | -0.965 | Destabilizing | 0.923 | D | 0.737 | prob.delet. | None | None | None | None | N |
I/S | 0.7907 | likely_pathogenic | 0.8082 | pathogenic | -2.173 | Highly Destabilizing | 0.565 | D | 0.613 | neutral | N | 0.430435743 | None | None | N |
I/T | 0.7345 | likely_pathogenic | 0.7373 | pathogenic | -1.882 | Destabilizing | 0.008 | N | 0.303 | neutral | N | 0.461625441 | None | None | N |
I/V | 0.1047 | likely_benign | 0.1012 | benign | -1.15 | Destabilizing | 0.014 | N | 0.141 | neutral | N | 0.391226781 | None | None | N |
I/W | 0.9916 | likely_pathogenic | 0.9908 | pathogenic | -1.441 | Destabilizing | 0.996 | D | 0.754 | deleterious | None | None | None | None | N |
I/Y | 0.9552 | likely_pathogenic | 0.9536 | pathogenic | -1.149 | Destabilizing | 0.987 | D | 0.641 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.