Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33347 | 100264;100265;100266 | chr2:178537070;178537069;178537068 | chr2:179401797;179401796;179401795 |
N2AB | 31706 | 95341;95342;95343 | chr2:178537070;178537069;178537068 | chr2:179401797;179401796;179401795 |
N2A | 30779 | 92560;92561;92562 | chr2:178537070;178537069;178537068 | chr2:179401797;179401796;179401795 |
N2B | 24282 | 73069;73070;73071 | chr2:178537070;178537069;178537068 | chr2:179401797;179401796;179401795 |
Novex-1 | 24407 | 73444;73445;73446 | chr2:178537070;178537069;178537068 | chr2:179401797;179401796;179401795 |
Novex-2 | 24474 | 73645;73646;73647 | chr2:178537070;178537069;178537068 | chr2:179401797;179401796;179401795 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1575319690 | None | 0.949 | N | 0.645 | 0.304 | 0.27479166964 | gnomAD-4.0.0 | 3.60097E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.9375E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.104 | likely_benign | 0.1116 | benign | -0.391 | Destabilizing | 0.034 | N | 0.153 | neutral | N | 0.442791751 | None | None | I |
S/C | 0.2546 | likely_benign | 0.2661 | benign | -0.404 | Destabilizing | 0.996 | D | 0.633 | neutral | None | None | None | None | I |
S/D | 0.726 | likely_pathogenic | 0.7785 | pathogenic | 0.365 | Stabilizing | 0.961 | D | 0.523 | neutral | None | None | None | None | I |
S/E | 0.7831 | likely_pathogenic | 0.8387 | pathogenic | 0.308 | Stabilizing | 0.875 | D | 0.505 | neutral | None | None | None | None | I |
S/F | 0.5253 | ambiguous | 0.5522 | ambiguous | -0.881 | Destabilizing | 0.858 | D | 0.653 | neutral | None | None | None | None | I |
S/G | 0.145 | likely_benign | 0.1498 | benign | -0.542 | Destabilizing | 0.775 | D | 0.457 | neutral | None | None | None | None | I |
S/H | 0.6411 | likely_pathogenic | 0.6931 | pathogenic | -0.91 | Destabilizing | 0.996 | D | 0.636 | neutral | None | None | None | None | I |
S/I | 0.4438 | ambiguous | 0.4987 | ambiguous | -0.118 | Destabilizing | 0.858 | D | 0.541 | neutral | None | None | None | None | I |
S/K | 0.8876 | likely_pathogenic | 0.9183 | pathogenic | -0.418 | Destabilizing | 0.875 | D | 0.511 | neutral | None | None | None | None | I |
S/L | 0.2347 | likely_benign | 0.2435 | benign | -0.118 | Destabilizing | 0.008 | N | 0.29 | neutral | N | 0.48144614 | None | None | I |
S/M | 0.3707 | ambiguous | 0.4017 | ambiguous | -0.133 | Destabilizing | 0.923 | D | 0.649 | neutral | None | None | None | None | I |
S/N | 0.2486 | likely_benign | 0.2861 | benign | -0.292 | Destabilizing | 0.987 | D | 0.553 | neutral | None | None | None | None | I |
S/P | 0.2172 | likely_benign | 0.2238 | benign | -0.178 | Destabilizing | 0.949 | D | 0.645 | neutral | N | 0.437327217 | None | None | I |
S/Q | 0.69 | likely_pathogenic | 0.7457 | pathogenic | -0.43 | Destabilizing | 0.987 | D | 0.576 | neutral | None | None | None | None | I |
S/R | 0.8397 | likely_pathogenic | 0.8753 | pathogenic | -0.255 | Destabilizing | 0.961 | D | 0.649 | neutral | None | None | None | None | I |
S/T | 0.1308 | likely_benign | 0.1369 | benign | -0.364 | Destabilizing | 0.722 | D | 0.478 | neutral | N | 0.399075473 | None | None | I |
S/V | 0.3932 | ambiguous | 0.4427 | ambiguous | -0.178 | Destabilizing | 0.633 | D | 0.515 | neutral | None | None | None | None | I |
S/W | 0.6717 | likely_pathogenic | 0.7229 | pathogenic | -0.915 | Destabilizing | 0.996 | D | 0.721 | prob.delet. | None | None | None | None | I |
S/Y | 0.4579 | ambiguous | 0.5021 | ambiguous | -0.609 | Destabilizing | 0.961 | D | 0.658 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.