Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33355 | 100288;100289;100290 | chr2:178537046;178537045;178537044 | chr2:179401773;179401772;179401771 |
N2AB | 31714 | 95365;95366;95367 | chr2:178537046;178537045;178537044 | chr2:179401773;179401772;179401771 |
N2A | 30787 | 92584;92585;92586 | chr2:178537046;178537045;178537044 | chr2:179401773;179401772;179401771 |
N2B | 24290 | 73093;73094;73095 | chr2:178537046;178537045;178537044 | chr2:179401773;179401772;179401771 |
Novex-1 | 24415 | 73468;73469;73470 | chr2:178537046;178537045;178537044 | chr2:179401773;179401772;179401771 |
Novex-2 | 24482 | 73669;73670;73671 | chr2:178537046;178537045;178537044 | chr2:179401773;179401772;179401771 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/T | None | None | 0.998 | N | 0.585 | 0.497 | 0.355865052028 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5414 | ambiguous | 0.4362 | ambiguous | -0.148 | Destabilizing | 0.997 | D | 0.549 | neutral | None | None | None | None | I |
N/C | 0.6489 | likely_pathogenic | 0.5191 | ambiguous | 0.256 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
N/D | 0.3273 | likely_benign | 0.2247 | benign | 0.19 | Stabilizing | 0.996 | D | 0.506 | neutral | N | 0.451387018 | None | None | I |
N/E | 0.7559 | likely_pathogenic | 0.6504 | pathogenic | 0.136 | Stabilizing | 0.994 | D | 0.505 | neutral | None | None | None | None | I |
N/F | 0.8845 | likely_pathogenic | 0.8101 | pathogenic | -0.678 | Destabilizing | 1.0 | D | 0.658 | neutral | None | None | None | None | I |
N/G | 0.3493 | ambiguous | 0.2918 | benign | -0.269 | Destabilizing | 0.998 | D | 0.481 | neutral | None | None | None | None | I |
N/H | 0.2254 | likely_benign | 0.1811 | benign | -0.272 | Destabilizing | 0.999 | D | 0.635 | neutral | N | 0.473001399 | None | None | I |
N/I | 0.8204 | likely_pathogenic | 0.7114 | pathogenic | 0.072 | Stabilizing | 1.0 | D | 0.671 | neutral | N | 0.490398092 | None | None | I |
N/K | 0.7017 | likely_pathogenic | 0.5919 | pathogenic | 0.167 | Stabilizing | 0.992 | D | 0.553 | neutral | N | 0.430379815 | None | None | I |
N/L | 0.6658 | likely_pathogenic | 0.5579 | ambiguous | 0.072 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | I |
N/M | 0.7753 | likely_pathogenic | 0.6772 | pathogenic | 0.209 | Stabilizing | 1.0 | D | 0.632 | neutral | None | None | None | None | I |
N/P | 0.8415 | likely_pathogenic | 0.7636 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.612 | neutral | None | None | None | None | I |
N/Q | 0.626 | likely_pathogenic | 0.5423 | ambiguous | -0.23 | Destabilizing | 0.967 | D | 0.312 | neutral | None | None | None | None | I |
N/R | 0.7113 | likely_pathogenic | 0.624 | pathogenic | 0.232 | Stabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | I |
N/S | 0.1492 | likely_benign | 0.1239 | benign | -0.016 | Destabilizing | 0.996 | D | 0.471 | neutral | N | 0.505626935 | None | None | I |
N/T | 0.4241 | ambiguous | 0.3283 | benign | 0.057 | Stabilizing | 0.998 | D | 0.585 | neutral | N | 0.478027829 | None | None | I |
N/V | 0.8045 | likely_pathogenic | 0.6986 | pathogenic | 0.023 | Stabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | I |
N/W | 0.9497 | likely_pathogenic | 0.9186 | pathogenic | -0.763 | Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | I |
N/Y | 0.4516 | ambiguous | 0.3529 | ambiguous | -0.45 | Destabilizing | 1.0 | D | 0.642 | neutral | N | 0.496892552 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.