Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33357 | 100294;100295;100296 | chr2:178537040;178537039;178537038 | chr2:179401767;179401766;179401765 |
N2AB | 31716 | 95371;95372;95373 | chr2:178537040;178537039;178537038 | chr2:179401767;179401766;179401765 |
N2A | 30789 | 92590;92591;92592 | chr2:178537040;178537039;178537038 | chr2:179401767;179401766;179401765 |
N2B | 24292 | 73099;73100;73101 | chr2:178537040;178537039;178537038 | chr2:179401767;179401766;179401765 |
Novex-1 | 24417 | 73474;73475;73476 | chr2:178537040;178537039;178537038 | chr2:179401767;179401766;179401765 |
Novex-2 | 24484 | 73675;73676;73677 | chr2:178537040;178537039;178537038 | chr2:179401767;179401766;179401765 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.026 | N | 0.229 | 0.148 | 0.220303561663 | gnomAD-4.0.0 | 6.84498E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16074E-05 | 0 |
T/K | None | None | 0.968 | N | 0.521 | 0.203 | 0.284539287134 | gnomAD-4.0.0 | 6.16048E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.09705E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1035 | likely_benign | 0.0839 | benign | -0.958 | Destabilizing | 0.896 | D | 0.416 | neutral | N | 0.50970739 | None | None | N |
T/C | 0.5079 | ambiguous | 0.3978 | ambiguous | -0.604 | Destabilizing | 0.999 | D | 0.596 | neutral | None | None | None | None | N |
T/D | 0.4712 | ambiguous | 0.335 | benign | -0.024 | Destabilizing | 0.952 | D | 0.506 | neutral | None | None | None | None | N |
T/E | 0.3049 | likely_benign | 0.2256 | benign | 0.005 | Stabilizing | 0.976 | D | 0.503 | neutral | None | None | None | None | N |
T/F | 0.3603 | ambiguous | 0.2416 | benign | -1.021 | Destabilizing | 0.976 | D | 0.635 | neutral | None | None | None | None | N |
T/G | 0.3789 | ambiguous | 0.2775 | benign | -1.234 | Destabilizing | 0.851 | D | 0.523 | neutral | None | None | None | None | N |
T/H | 0.3203 | likely_benign | 0.2393 | benign | -1.397 | Destabilizing | 0.997 | D | 0.637 | neutral | None | None | None | None | N |
T/I | 0.1507 | likely_benign | 0.1028 | benign | -0.306 | Destabilizing | 0.026 | N | 0.229 | neutral | N | 0.429323809 | None | None | N |
T/K | 0.1967 | likely_benign | 0.1641 | benign | -0.663 | Destabilizing | 0.968 | D | 0.521 | neutral | N | 0.468474056 | None | None | N |
T/L | 0.1189 | likely_benign | 0.0866 | benign | -0.306 | Destabilizing | 0.702 | D | 0.489 | neutral | None | None | None | None | N |
T/M | 0.1209 | likely_benign | 0.0872 | benign | -0.137 | Destabilizing | 0.993 | D | 0.584 | neutral | None | None | None | None | N |
T/N | 0.1589 | likely_benign | 0.1121 | benign | -0.703 | Destabilizing | 0.076 | N | 0.224 | neutral | None | None | None | None | N |
T/P | 0.2609 | likely_benign | 0.1882 | benign | -0.491 | Destabilizing | 0.995 | D | 0.581 | neutral | N | 0.475447389 | None | None | N |
T/Q | 0.2278 | likely_benign | 0.1833 | benign | -0.774 | Destabilizing | 0.988 | D | 0.573 | neutral | None | None | None | None | N |
T/R | 0.1906 | likely_benign | 0.1494 | benign | -0.486 | Destabilizing | 0.968 | D | 0.579 | neutral | N | 0.505010859 | None | None | N |
T/S | 0.1556 | likely_benign | 0.1188 | benign | -1.038 | Destabilizing | 0.811 | D | 0.422 | neutral | N | 0.484118299 | None | None | N |
T/V | 0.1282 | likely_benign | 0.0962 | benign | -0.491 | Destabilizing | 0.702 | D | 0.459 | neutral | None | None | None | None | N |
T/W | 0.7238 | likely_pathogenic | 0.5943 | pathogenic | -0.953 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/Y | 0.4236 | ambiguous | 0.3148 | benign | -0.707 | Destabilizing | 0.996 | D | 0.639 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.