Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33374 | 100345;100346;100347 | chr2:178536989;178536988;178536987 | chr2:179401716;179401715;179401714 |
N2AB | 31733 | 95422;95423;95424 | chr2:178536989;178536988;178536987 | chr2:179401716;179401715;179401714 |
N2A | 30806 | 92641;92642;92643 | chr2:178536989;178536988;178536987 | chr2:179401716;179401715;179401714 |
N2B | 24309 | 73150;73151;73152 | chr2:178536989;178536988;178536987 | chr2:179401716;179401715;179401714 |
Novex-1 | 24434 | 73525;73526;73527 | chr2:178536989;178536988;178536987 | chr2:179401716;179401715;179401714 |
Novex-2 | 24501 | 73726;73727;73728 | chr2:178536989;178536988;178536987 | chr2:179401716;179401715;179401714 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.219 | N | 0.253 | 0.108 | 0.42324137094 | gnomAD-4.0.0 | 1.36885E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79927E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5665 | likely_pathogenic | 0.5347 | ambiguous | -1.102 | Destabilizing | 0.964 | D | 0.621 | neutral | None | None | None | None | I |
I/C | 0.7688 | likely_pathogenic | 0.7356 | pathogenic | -0.887 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
I/D | 0.8389 | likely_pathogenic | 0.785 | pathogenic | -0.269 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
I/E | 0.7417 | likely_pathogenic | 0.7015 | pathogenic | -0.33 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | I |
I/F | 0.2701 | likely_benign | 0.2281 | benign | -0.986 | Destabilizing | 0.997 | D | 0.675 | neutral | N | 0.516729363 | None | None | I |
I/G | 0.8449 | likely_pathogenic | 0.8202 | pathogenic | -1.318 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | I |
I/H | 0.72 | likely_pathogenic | 0.6552 | pathogenic | -0.476 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | I |
I/K | 0.5637 | ambiguous | 0.4995 | ambiguous | -0.45 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | I |
I/L | 0.1763 | likely_benign | 0.16 | benign | -0.633 | Destabilizing | 0.817 | D | 0.28 | neutral | N | 0.473303873 | None | None | I |
I/M | 0.1658 | likely_benign | 0.1506 | benign | -0.514 | Destabilizing | 0.997 | D | 0.705 | prob.neutral | N | 0.505840365 | None | None | I |
I/N | 0.4007 | ambiguous | 0.3083 | benign | -0.251 | Destabilizing | 0.999 | D | 0.803 | deleterious | N | 0.501413194 | None | None | I |
I/P | 0.8542 | likely_pathogenic | 0.8332 | pathogenic | -0.756 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | I |
I/Q | 0.6295 | likely_pathogenic | 0.5828 | pathogenic | -0.516 | Destabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | I |
I/R | 0.5238 | ambiguous | 0.4491 | ambiguous | 0.125 | Stabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | I |
I/S | 0.5006 | ambiguous | 0.4485 | ambiguous | -0.872 | Destabilizing | 0.997 | D | 0.753 | deleterious | N | 0.510552752 | None | None | I |
I/T | 0.3495 | ambiguous | 0.3276 | benign | -0.821 | Destabilizing | 0.98 | D | 0.64 | neutral | N | 0.484694302 | None | None | I |
I/V | 0.0955 | likely_benign | 0.0959 | benign | -0.756 | Destabilizing | 0.219 | N | 0.253 | neutral | N | 0.411159336 | None | None | I |
I/W | 0.9022 | likely_pathogenic | 0.8756 | pathogenic | -0.925 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
I/Y | 0.6874 | likely_pathogenic | 0.6171 | pathogenic | -0.672 | Destabilizing | 0.999 | D | 0.74 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.