Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33379 | 100360;100361;100362 | chr2:178536974;178536973;178536972 | chr2:179401701;179401700;179401699 |
N2AB | 31738 | 95437;95438;95439 | chr2:178536974;178536973;178536972 | chr2:179401701;179401700;179401699 |
N2A | 30811 | 92656;92657;92658 | chr2:178536974;178536973;178536972 | chr2:179401701;179401700;179401699 |
N2B | 24314 | 73165;73166;73167 | chr2:178536974;178536973;178536972 | chr2:179401701;179401700;179401699 |
Novex-1 | 24439 | 73540;73541;73542 | chr2:178536974;178536973;178536972 | chr2:179401701;179401700;179401699 |
Novex-2 | 24506 | 73741;73742;73743 | chr2:178536974;178536973;178536972 | chr2:179401701;179401700;179401699 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.999 | N | 0.754 | 0.458 | 0.437420747294 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
E/K | None | None | 0.997 | N | 0.835 | 0.416 | 0.344251166708 | gnomAD-4.0.0 | 6.84462E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52232E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2949 | likely_benign | 0.2905 | benign | -0.137 | Destabilizing | 0.997 | D | 0.817 | deleterious | N | 0.509088527 | None | None | N |
E/C | 0.9339 | likely_pathogenic | 0.9314 | pathogenic | -0.089 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/D | 0.3753 | ambiguous | 0.3965 | ambiguous | -0.934 | Destabilizing | 0.997 | D | 0.772 | deleterious | N | 0.509261886 | None | None | N |
E/F | 0.9014 | likely_pathogenic | 0.9058 | pathogenic | 0.788 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
E/G | 0.5405 | ambiguous | 0.5316 | ambiguous | -0.566 | Destabilizing | 0.999 | D | 0.754 | deleterious | N | 0.469683263 | None | None | N |
E/H | 0.7838 | likely_pathogenic | 0.7911 | pathogenic | 0.64 | Stabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
E/I | 0.5256 | ambiguous | 0.5427 | ambiguous | 1.047 | Stabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
E/K | 0.4304 | ambiguous | 0.3736 | ambiguous | -0.082 | Destabilizing | 0.997 | D | 0.835 | deleterious | N | 0.504298783 | None | None | N |
E/L | 0.5992 | likely_pathogenic | 0.617 | pathogenic | 1.047 | Stabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
E/M | 0.6506 | likely_pathogenic | 0.655 | pathogenic | 1.275 | Stabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
E/N | 0.5873 | likely_pathogenic | 0.6216 | pathogenic | -0.841 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
E/P | 0.817 | likely_pathogenic | 0.8558 | pathogenic | 0.676 | Stabilizing | 0.999 | D | 0.79 | deleterious | None | None | None | None | N |
E/Q | 0.2824 | likely_benign | 0.2819 | benign | -0.602 | Destabilizing | 0.999 | D | 0.804 | deleterious | N | 0.506800371 | None | None | N |
E/R | 0.6084 | likely_pathogenic | 0.569 | pathogenic | 0.212 | Stabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
E/S | 0.4354 | ambiguous | 0.4627 | ambiguous | -1.153 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
E/T | 0.3762 | ambiguous | 0.3983 | ambiguous | -0.771 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
E/V | 0.3018 | likely_benign | 0.3153 | benign | 0.676 | Stabilizing | 0.999 | D | 0.794 | deleterious | D | 0.523231261 | None | None | N |
E/W | 0.9781 | likely_pathogenic | 0.9788 | pathogenic | 1.018 | Stabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
E/Y | 0.8722 | likely_pathogenic | 0.8775 | pathogenic | 1.086 | Stabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.