Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33381 | 100366;100367;100368 | chr2:178536968;178536967;178536966 | chr2:179401695;179401694;179401693 |
N2AB | 31740 | 95443;95444;95445 | chr2:178536968;178536967;178536966 | chr2:179401695;179401694;179401693 |
N2A | 30813 | 92662;92663;92664 | chr2:178536968;178536967;178536966 | chr2:179401695;179401694;179401693 |
N2B | 24316 | 73171;73172;73173 | chr2:178536968;178536967;178536966 | chr2:179401695;179401694;179401693 |
Novex-1 | 24441 | 73546;73547;73548 | chr2:178536968;178536967;178536966 | chr2:179401695;179401694;179401693 |
Novex-2 | 24508 | 73747;73748;73749 | chr2:178536968;178536967;178536966 | chr2:179401695;179401694;179401693 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | 0.303 | N | 0.487 | 0.378 | 0.634884455959 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
S/P | None | None | None | N | 0.107 | 0.122 | 0.0297737177859 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.08 | likely_benign | 0.0706 | benign | -0.233 | Destabilizing | None | N | 0.079 | neutral | N | 0.512435477 | None | None | I |
S/C | 0.2452 | likely_benign | 0.167 | benign | -0.669 | Destabilizing | 0.621 | D | 0.417 | neutral | N | 0.495496519 | None | None | I |
S/D | 0.2387 | likely_benign | 0.2486 | benign | -0.219 | Destabilizing | 0.075 | N | 0.34 | neutral | None | None | None | None | I |
S/E | 0.2882 | likely_benign | 0.3005 | benign | -0.316 | Destabilizing | 0.075 | N | 0.371 | neutral | None | None | None | None | I |
S/F | 0.3986 | ambiguous | 0.2945 | benign | -0.996 | Destabilizing | 0.303 | N | 0.487 | neutral | N | 0.483126256 | None | None | I |
S/G | 0.1287 | likely_benign | 0.1236 | benign | -0.228 | Destabilizing | 0.016 | N | 0.388 | neutral | None | None | None | None | I |
S/H | 0.3119 | likely_benign | 0.2717 | benign | -0.4 | Destabilizing | 0.637 | D | 0.423 | neutral | None | None | None | None | I |
S/I | 0.3031 | likely_benign | 0.2376 | benign | -0.359 | Destabilizing | 0.125 | N | 0.525 | neutral | None | None | None | None | I |
S/K | 0.444 | ambiguous | 0.4315 | ambiguous | -0.522 | Destabilizing | 0.075 | N | 0.365 | neutral | None | None | None | None | I |
S/L | 0.1737 | likely_benign | 0.1354 | benign | -0.359 | Destabilizing | 0.039 | N | 0.439 | neutral | None | None | None | None | I |
S/M | 0.3042 | likely_benign | 0.2517 | benign | -0.442 | Destabilizing | 0.366 | N | 0.431 | neutral | None | None | None | None | I |
S/N | 0.1338 | likely_benign | 0.133 | benign | -0.395 | Destabilizing | 0.075 | N | 0.444 | neutral | None | None | None | None | I |
S/P | 0.0591 | likely_benign | 0.0565 | benign | -0.3 | Destabilizing | None | N | 0.107 | neutral | N | 0.46578247 | None | None | I |
S/Q | 0.2787 | likely_benign | 0.2703 | benign | -0.547 | Destabilizing | 0.366 | N | 0.435 | neutral | None | None | None | None | I |
S/R | 0.4596 | ambiguous | 0.4249 | ambiguous | -0.296 | Destabilizing | 0.221 | N | 0.552 | neutral | None | None | None | None | I |
S/T | 0.1056 | likely_benign | 0.0915 | benign | -0.511 | Destabilizing | None | N | 0.121 | neutral | N | 0.420680109 | None | None | I |
S/V | 0.2818 | likely_benign | 0.2258 | benign | -0.3 | Destabilizing | 0.039 | N | 0.467 | neutral | None | None | None | None | I |
S/W | 0.5766 | likely_pathogenic | 0.4755 | ambiguous | -1.117 | Destabilizing | 0.869 | D | 0.469 | neutral | None | None | None | None | I |
S/Y | 0.3349 | likely_benign | 0.2641 | benign | -0.81 | Destabilizing | 0.303 | N | 0.471 | neutral | N | 0.494736051 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.