Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33386 | 100381;100382;100383 | chr2:178536953;178536952;178536951 | chr2:179401680;179401679;179401678 |
N2AB | 31745 | 95458;95459;95460 | chr2:178536953;178536952;178536951 | chr2:179401680;179401679;179401678 |
N2A | 30818 | 92677;92678;92679 | chr2:178536953;178536952;178536951 | chr2:179401680;179401679;179401678 |
N2B | 24321 | 73186;73187;73188 | chr2:178536953;178536952;178536951 | chr2:179401680;179401679;179401678 |
Novex-1 | 24446 | 73561;73562;73563 | chr2:178536953;178536952;178536951 | chr2:179401680;179401679;179401678 |
Novex-2 | 24513 | 73762;73763;73764 | chr2:178536953;178536952;178536951 | chr2:179401680;179401679;179401678 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.799 | N | 0.724 | 0.294 | 0.569563978121 | gnomAD-4.0.0 | 2.74622E-06 | None | None | None | None | N | None | 0 | 2.24709E-05 | None | 0 | 0 | None | 0 | 0 | 2.7071E-06 | 0 | 0 |
I/V | rs1691868838 | None | 0.022 | N | 0.165 | 0.08 | 0.518038692251 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
I/V | rs1691868838 | None | 0.022 | N | 0.165 | 0.08 | 0.518038692251 | gnomAD-4.0.0 | 1.24349E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.7006E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8337 | likely_pathogenic | 0.868 | pathogenic | -3.005 | Highly Destabilizing | 0.685 | D | 0.671 | prob.neutral | None | None | None | None | N |
I/C | 0.9177 | likely_pathogenic | 0.9268 | pathogenic | -2.482 | Highly Destabilizing | 0.998 | D | 0.703 | prob.delet. | None | None | None | None | N |
I/D | 0.9972 | likely_pathogenic | 0.9978 | pathogenic | -3.575 | Highly Destabilizing | 0.991 | D | 0.803 | deleterious | None | None | None | None | N |
I/E | 0.9896 | likely_pathogenic | 0.9927 | pathogenic | -3.336 | Highly Destabilizing | 0.974 | D | 0.761 | deleterious | None | None | None | None | N |
I/F | 0.6096 | likely_pathogenic | 0.5808 | pathogenic | -1.648 | Destabilizing | 0.933 | D | 0.695 | prob.delet. | N | 0.515859784 | None | None | N |
I/G | 0.9794 | likely_pathogenic | 0.9829 | pathogenic | -3.529 | Highly Destabilizing | 0.974 | D | 0.747 | deleterious | None | None | None | None | N |
I/H | 0.9888 | likely_pathogenic | 0.9909 | pathogenic | -2.828 | Highly Destabilizing | 0.998 | D | 0.8 | deleterious | None | None | None | None | N |
I/K | 0.9774 | likely_pathogenic | 0.9813 | pathogenic | -2.275 | Highly Destabilizing | 0.949 | D | 0.761 | deleterious | None | None | None | None | N |
I/L | 0.2907 | likely_benign | 0.2721 | benign | -1.458 | Destabilizing | 0.11 | N | 0.475 | neutral | N | 0.478896119 | None | None | N |
I/M | 0.2646 | likely_benign | 0.2471 | benign | -1.684 | Destabilizing | 0.451 | N | 0.511 | neutral | N | 0.499698253 | None | None | N |
I/N | 0.9507 | likely_pathogenic | 0.9597 | pathogenic | -2.723 | Highly Destabilizing | 0.989 | D | 0.791 | deleterious | N | 0.468260777 | None | None | N |
I/P | 0.9363 | likely_pathogenic | 0.9521 | pathogenic | -1.961 | Destabilizing | 0.991 | D | 0.798 | deleterious | None | None | None | None | N |
I/Q | 0.9623 | likely_pathogenic | 0.9728 | pathogenic | -2.559 | Highly Destabilizing | 0.974 | D | 0.79 | deleterious | None | None | None | None | N |
I/R | 0.961 | likely_pathogenic | 0.9688 | pathogenic | -1.961 | Destabilizing | 0.974 | D | 0.788 | deleterious | None | None | None | None | N |
I/S | 0.9009 | likely_pathogenic | 0.925 | pathogenic | -3.357 | Highly Destabilizing | 0.966 | D | 0.713 | prob.delet. | N | 0.463145442 | None | None | N |
I/T | 0.8858 | likely_pathogenic | 0.8965 | pathogenic | -2.984 | Highly Destabilizing | 0.799 | D | 0.724 | deleterious | N | 0.451405661 | None | None | N |
I/V | 0.1939 | likely_benign | 0.19 | benign | -1.961 | Destabilizing | 0.022 | N | 0.165 | neutral | N | 0.473050369 | None | None | N |
I/W | 0.984 | likely_pathogenic | 0.9848 | pathogenic | -2.01 | Highly Destabilizing | 0.998 | D | 0.789 | deleterious | None | None | None | None | N |
I/Y | 0.9626 | likely_pathogenic | 0.9667 | pathogenic | -1.868 | Destabilizing | 0.974 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.