Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33387 | 100384;100385;100386 | chr2:178536950;178536949;178536948 | chr2:179401677;179401676;179401675 |
N2AB | 31746 | 95461;95462;95463 | chr2:178536950;178536949;178536948 | chr2:179401677;179401676;179401675 |
N2A | 30819 | 92680;92681;92682 | chr2:178536950;178536949;178536948 | chr2:179401677;179401676;179401675 |
N2B | 24322 | 73189;73190;73191 | chr2:178536950;178536949;178536948 | chr2:179401677;179401676;179401675 |
Novex-1 | 24447 | 73564;73565;73566 | chr2:178536950;178536949;178536948 | chr2:179401677;179401676;179401675 |
Novex-2 | 24514 | 73765;73766;73767 | chr2:178536950;178536949;178536948 | chr2:179401677;179401676;179401675 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.974 | N | 0.662 | 0.311 | 0.181679512989 | gnomAD-4.0.0 | 1.37387E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80554E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7207 | likely_pathogenic | 0.7214 | pathogenic | -0.329 | Destabilizing | 0.933 | D | 0.576 | neutral | None | None | None | None | N |
K/C | 0.8888 | likely_pathogenic | 0.8783 | pathogenic | -0.42 | Destabilizing | 0.999 | D | 0.835 | deleterious | None | None | None | None | N |
K/D | 0.8684 | likely_pathogenic | 0.8844 | pathogenic | 0.132 | Stabilizing | 0.99 | D | 0.707 | prob.delet. | None | None | None | None | N |
K/E | 0.4647 | ambiguous | 0.4808 | ambiguous | 0.227 | Stabilizing | 0.914 | D | 0.523 | neutral | N | 0.459685494 | None | None | N |
K/F | 0.9699 | likely_pathogenic | 0.9693 | pathogenic | -0.021 | Destabilizing | 0.999 | D | 0.81 | deleterious | None | None | None | None | N |
K/G | 0.805 | likely_pathogenic | 0.8141 | pathogenic | -0.677 | Destabilizing | 0.98 | D | 0.596 | neutral | None | None | None | None | N |
K/H | 0.5237 | ambiguous | 0.5248 | ambiguous | -0.973 | Destabilizing | 0.997 | D | 0.703 | prob.delet. | None | None | None | None | N |
K/I | 0.8154 | likely_pathogenic | 0.8055 | pathogenic | 0.555 | Stabilizing | 0.99 | D | 0.825 | deleterious | None | None | None | None | N |
K/L | 0.8073 | likely_pathogenic | 0.7961 | pathogenic | 0.555 | Stabilizing | 0.98 | D | 0.596 | neutral | None | None | None | None | N |
K/M | 0.7202 | likely_pathogenic | 0.697 | pathogenic | 0.308 | Stabilizing | 0.999 | D | 0.704 | prob.delet. | N | 0.471730271 | None | None | N |
K/N | 0.7434 | likely_pathogenic | 0.7453 | pathogenic | -0.197 | Destabilizing | 0.974 | D | 0.662 | prob.neutral | N | 0.486872011 | None | None | N |
K/P | 0.9308 | likely_pathogenic | 0.9528 | pathogenic | 0.291 | Stabilizing | 0.997 | D | 0.709 | prob.delet. | None | None | None | None | N |
K/Q | 0.2384 | likely_benign | 0.2283 | benign | -0.269 | Destabilizing | 0.974 | D | 0.689 | prob.delet. | N | 0.49498308 | None | None | N |
K/R | 0.1162 | likely_benign | 0.1109 | benign | -0.454 | Destabilizing | 0.071 | N | 0.259 | neutral | N | 0.489462617 | None | None | N |
K/S | 0.7153 | likely_pathogenic | 0.7158 | pathogenic | -0.832 | Destabilizing | 0.933 | D | 0.635 | neutral | None | None | None | None | N |
K/T | 0.4369 | ambiguous | 0.4244 | ambiguous | -0.538 | Destabilizing | 0.974 | D | 0.656 | prob.neutral | N | 0.487499747 | None | None | N |
K/V | 0.7652 | likely_pathogenic | 0.7598 | pathogenic | 0.291 | Stabilizing | 0.99 | D | 0.77 | deleterious | None | None | None | None | N |
K/W | 0.9616 | likely_pathogenic | 0.9636 | pathogenic | 0.087 | Stabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
K/Y | 0.9208 | likely_pathogenic | 0.919 | pathogenic | 0.371 | Stabilizing | 0.997 | D | 0.801 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.