Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33392 | 100399;100400;100401 | chr2:178536573;178536572;178536571 | chr2:179401300;179401299;179401298 |
N2AB | 31751 | 95476;95477;95478 | chr2:178536573;178536572;178536571 | chr2:179401300;179401299;179401298 |
N2A | 30824 | 92695;92696;92697 | chr2:178536573;178536572;178536571 | chr2:179401300;179401299;179401298 |
N2B | 24327 | 73204;73205;73206 | chr2:178536573;178536572;178536571 | chr2:179401300;179401299;179401298 |
Novex-1 | 24452 | 73579;73580;73581 | chr2:178536573;178536572;178536571 | chr2:179401300;179401299;179401298 |
Novex-2 | 24519 | 73780;73781;73782 | chr2:178536573;178536572;178536571 | chr2:179401300;179401299;179401298 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1363009157 | 0.29 | 0.012 | N | 0.296 | 0.136 | 0.17948927462 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | I | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs1363009157 | 0.29 | 0.012 | N | 0.296 | 0.136 | 0.17948927462 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | rs1363009157 | 0.29 | 0.012 | N | 0.296 | 0.136 | 0.17948927462 | gnomAD-4.0.0 | 6.56927E-06 | None | None | None | None | I | None | 2.4115E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5227 | ambiguous | 0.4947 | ambiguous | -0.155 | Destabilizing | 0.717 | D | 0.56 | neutral | None | None | None | None | I |
K/C | 0.834 | likely_pathogenic | 0.7725 | pathogenic | -0.247 | Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | I |
K/D | 0.8471 | likely_pathogenic | 0.8436 | pathogenic | 0.196 | Stabilizing | 0.947 | D | 0.551 | neutral | None | None | None | None | I |
K/E | 0.3864 | ambiguous | 0.3693 | ambiguous | 0.191 | Stabilizing | 0.657 | D | 0.535 | neutral | N | 0.464220242 | None | None | I |
K/F | 0.8636 | likely_pathogenic | 0.8502 | pathogenic | -0.464 | Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | I |
K/G | 0.754 | likely_pathogenic | 0.7215 | pathogenic | -0.34 | Destabilizing | 0.835 | D | 0.519 | neutral | None | None | None | None | I |
K/H | 0.5637 | ambiguous | 0.5205 | ambiguous | -0.706 | Destabilizing | 0.993 | D | 0.603 | neutral | None | None | None | None | I |
K/I | 0.3326 | likely_benign | 0.3304 | benign | 0.249 | Stabilizing | 0.973 | D | 0.843 | deleterious | None | None | None | None | I |
K/L | 0.4524 | ambiguous | 0.423 | ambiguous | 0.249 | Stabilizing | 0.835 | D | 0.519 | neutral | None | None | None | None | I |
K/M | 0.2855 | likely_benign | 0.2813 | benign | 0.276 | Stabilizing | 0.99 | D | 0.595 | neutral | N | 0.482770634 | None | None | I |
K/N | 0.5906 | likely_pathogenic | 0.5864 | pathogenic | 0.279 | Stabilizing | 0.931 | D | 0.617 | neutral | N | 0.471667819 | None | None | I |
K/P | 0.6289 | likely_pathogenic | 0.6004 | pathogenic | 0.142 | Stabilizing | 0.973 | D | 0.668 | prob.neutral | None | None | None | None | I |
K/Q | 0.2368 | likely_benign | 0.2103 | benign | 0.012 | Stabilizing | 0.106 | N | 0.261 | neutral | N | 0.519612165 | None | None | I |
K/R | 0.1202 | likely_benign | 0.1049 | benign | 0.035 | Stabilizing | 0.012 | N | 0.296 | neutral | N | 0.470876856 | None | None | I |
K/S | 0.6609 | likely_pathogenic | 0.6513 | pathogenic | -0.309 | Destabilizing | 0.717 | D | 0.633 | neutral | None | None | None | None | I |
K/T | 0.294 | likely_benign | 0.2965 | benign | -0.167 | Destabilizing | 0.931 | D | 0.549 | neutral | N | 0.469626062 | None | None | I |
K/V | 0.3722 | ambiguous | 0.3616 | ambiguous | 0.142 | Stabilizing | 0.947 | D | 0.695 | prob.delet. | None | None | None | None | I |
K/W | 0.9321 | likely_pathogenic | 0.9133 | pathogenic | -0.403 | Destabilizing | 0.998 | D | 0.881 | deleterious | None | None | None | None | I |
K/Y | 0.7729 | likely_pathogenic | 0.7539 | pathogenic | -0.038 | Destabilizing | 0.973 | D | 0.849 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.