Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33398 | 100417;100418;100419 | chr2:178536555;178536554;178536553 | chr2:179401282;179401281;179401280 |
N2AB | 31757 | 95494;95495;95496 | chr2:178536555;178536554;178536553 | chr2:179401282;179401281;179401280 |
N2A | 30830 | 92713;92714;92715 | chr2:178536555;178536554;178536553 | chr2:179401282;179401281;179401280 |
N2B | 24333 | 73222;73223;73224 | chr2:178536555;178536554;178536553 | chr2:179401282;179401281;179401280 |
Novex-1 | 24458 | 73597;73598;73599 | chr2:178536555;178536554;178536553 | chr2:179401282;179401281;179401280 |
Novex-2 | 24525 | 73798;73799;73800 | chr2:178536555;178536554;178536553 | chr2:179401282;179401281;179401280 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | None | None | 0.012 | N | 0.114 | 0.065 | 0.104622674875 | gnomAD-4.0.0 | 1.94455E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.04591E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3438 | ambiguous | 0.2729 | benign | -0.299 | Destabilizing | 0.543 | D | 0.418 | neutral | None | None | None | None | N |
K/C | 0.6257 | likely_pathogenic | 0.507 | ambiguous | -0.333 | Destabilizing | 0.996 | D | 0.524 | neutral | None | None | None | None | N |
K/D | 0.7069 | likely_pathogenic | 0.6912 | pathogenic | -0.014 | Destabilizing | 0.742 | D | 0.421 | neutral | None | None | None | None | N |
K/E | 0.2147 | likely_benign | 0.196 | benign | 0.02 | Stabilizing | 0.309 | N | 0.489 | neutral | N | 0.496911451 | None | None | N |
K/F | 0.6855 | likely_pathogenic | 0.6135 | pathogenic | -0.338 | Destabilizing | 0.984 | D | 0.468 | neutral | None | None | None | None | N |
K/G | 0.5769 | likely_pathogenic | 0.513 | ambiguous | -0.572 | Destabilizing | 0.742 | D | 0.425 | neutral | None | None | None | None | N |
K/H | 0.3741 | ambiguous | 0.2998 | benign | -0.954 | Destabilizing | 0.953 | D | 0.446 | neutral | None | None | None | None | N |
K/I | 0.2178 | likely_benign | 0.1914 | benign | 0.365 | Stabilizing | 0.939 | D | 0.473 | neutral | N | 0.48225143 | None | None | N |
K/L | 0.296 | likely_benign | 0.2389 | benign | 0.365 | Stabilizing | 0.742 | D | 0.425 | neutral | None | None | None | None | N |
K/M | 0.181 | likely_benign | 0.1634 | benign | 0.373 | Stabilizing | 0.953 | D | 0.445 | neutral | None | None | None | None | N |
K/N | 0.3897 | ambiguous | 0.3635 | ambiguous | -0.016 | Destabilizing | 0.684 | D | 0.419 | neutral | N | 0.458310203 | None | None | N |
K/P | 0.5109 | ambiguous | 0.3811 | ambiguous | 0.174 | Stabilizing | 0.953 | D | 0.455 | neutral | None | None | None | None | N |
K/Q | 0.1269 | likely_benign | 0.1 | benign | -0.253 | Destabilizing | 0.012 | N | 0.114 | neutral | N | 0.437652504 | None | None | N |
K/R | 0.1071 | likely_benign | 0.1003 | benign | -0.271 | Destabilizing | 0.007 | N | 0.248 | neutral | N | 0.462876235 | None | None | N |
K/S | 0.4278 | ambiguous | 0.3741 | ambiguous | -0.636 | Destabilizing | 0.742 | D | 0.403 | neutral | None | None | None | None | N |
K/T | 0.179 | likely_benign | 0.1566 | benign | -0.43 | Destabilizing | 0.684 | D | 0.418 | neutral | N | 0.429187736 | None | None | N |
K/V | 0.2648 | likely_benign | 0.2231 | benign | 0.174 | Stabilizing | 0.953 | D | 0.427 | neutral | None | None | None | None | N |
K/W | 0.8415 | likely_pathogenic | 0.779 | pathogenic | -0.222 | Destabilizing | 0.996 | D | 0.599 | neutral | None | None | None | None | N |
K/Y | 0.5743 | likely_pathogenic | 0.5203 | ambiguous | 0.103 | Stabilizing | 0.984 | D | 0.469 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.