Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33407 | 100444;100445;100446 | chr2:178536528;178536527;178536526 | chr2:179401255;179401254;179401253 |
N2AB | 31766 | 95521;95522;95523 | chr2:178536528;178536527;178536526 | chr2:179401255;179401254;179401253 |
N2A | 30839 | 92740;92741;92742 | chr2:178536528;178536527;178536526 | chr2:179401255;179401254;179401253 |
N2B | 24342 | 73249;73250;73251 | chr2:178536528;178536527;178536526 | chr2:179401255;179401254;179401253 |
Novex-1 | 24467 | 73624;73625;73626 | chr2:178536528;178536527;178536526 | chr2:179401255;179401254;179401253 |
Novex-2 | 24534 | 73825;73826;73827 | chr2:178536528;178536527;178536526 | chr2:179401255;179401254;179401253 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | rs771684833 | -0.868 | 0.992 | N | 0.675 | 0.429 | 0.255777322467 | gnomAD-2.1.1 | 5.59E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.14E-05 | 0 |
D/H | rs771684833 | -0.868 | 0.992 | N | 0.675 | 0.429 | 0.255777322467 | gnomAD-4.0.0 | 5.08812E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.51994E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.397 | ambiguous | 0.4053 | ambiguous | -0.483 | Destabilizing | 0.698 | D | 0.631 | neutral | N | 0.482030755 | None | None | N |
D/C | 0.864 | likely_pathogenic | 0.8634 | pathogenic | -0.059 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
D/E | 0.2322 | likely_benign | 0.1977 | benign | -0.697 | Destabilizing | 0.014 | N | 0.302 | neutral | N | 0.487062604 | None | None | N |
D/F | 0.7809 | likely_pathogenic | 0.7766 | pathogenic | -0.673 | Destabilizing | 0.998 | D | 0.763 | deleterious | None | None | None | None | N |
D/G | 0.3082 | likely_benign | 0.3453 | ambiguous | -0.746 | Destabilizing | 0.822 | D | 0.564 | neutral | N | 0.47494041 | None | None | N |
D/H | 0.5598 | ambiguous | 0.5767 | pathogenic | -1.011 | Destabilizing | 0.992 | D | 0.675 | neutral | N | 0.515057282 | None | None | N |
D/I | 0.6931 | likely_pathogenic | 0.7123 | pathogenic | 0.182 | Stabilizing | 0.978 | D | 0.766 | deleterious | None | None | None | None | N |
D/K | 0.6891 | likely_pathogenic | 0.7209 | pathogenic | -0.163 | Destabilizing | 0.754 | D | 0.617 | neutral | None | None | None | None | N |
D/L | 0.6763 | likely_pathogenic | 0.6817 | pathogenic | 0.182 | Stabilizing | 0.956 | D | 0.763 | deleterious | None | None | None | None | N |
D/M | 0.8246 | likely_pathogenic | 0.8072 | pathogenic | 0.668 | Stabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | N |
D/N | 0.1357 | likely_benign | 0.1295 | benign | -0.411 | Destabilizing | 0.126 | N | 0.299 | neutral | N | 0.454814112 | None | None | N |
D/P | 0.9799 | likely_pathogenic | 0.9858 | pathogenic | -0.016 | Destabilizing | 0.978 | D | 0.677 | prob.neutral | None | None | None | None | N |
D/Q | 0.5847 | likely_pathogenic | 0.5932 | pathogenic | -0.367 | Destabilizing | 0.915 | D | 0.661 | neutral | None | None | None | None | N |
D/R | 0.7604 | likely_pathogenic | 0.7901 | pathogenic | -0.216 | Destabilizing | 0.956 | D | 0.73 | prob.delet. | None | None | None | None | N |
D/S | 0.2398 | likely_benign | 0.2408 | benign | -0.619 | Destabilizing | 0.754 | D | 0.508 | neutral | None | None | None | None | N |
D/T | 0.3348 | likely_benign | 0.3282 | benign | -0.408 | Destabilizing | 0.956 | D | 0.635 | neutral | None | None | None | None | N |
D/V | 0.502 | ambiguous | 0.5244 | ambiguous | -0.016 | Destabilizing | 0.942 | D | 0.764 | deleterious | N | 0.505161439 | None | None | N |
D/W | 0.9599 | likely_pathogenic | 0.9624 | pathogenic | -0.647 | Destabilizing | 0.998 | D | 0.757 | deleterious | None | None | None | None | N |
D/Y | 0.3721 | ambiguous | 0.4015 | ambiguous | -0.465 | Destabilizing | 0.997 | D | 0.76 | deleterious | N | 0.486803695 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.