Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33408 | 100447;100448;100449 | chr2:178536525;178536524;178536523 | chr2:179401252;179401251;179401250 |
N2AB | 31767 | 95524;95525;95526 | chr2:178536525;178536524;178536523 | chr2:179401252;179401251;179401250 |
N2A | 30840 | 92743;92744;92745 | chr2:178536525;178536524;178536523 | chr2:179401252;179401251;179401250 |
N2B | 24343 | 73252;73253;73254 | chr2:178536525;178536524;178536523 | chr2:179401252;179401251;179401250 |
Novex-1 | 24468 | 73627;73628;73629 | chr2:178536525;178536524;178536523 | chr2:179401252;179401251;179401250 |
Novex-2 | 24535 | 73828;73829;73830 | chr2:178536525;178536524;178536523 | chr2:179401252;179401251;179401250 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | rs1268223494 | -0.995 | 1.0 | N | 0.814 | 0.521 | 0.554920031903 | gnomAD-2.1.1 | 5.51E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.13E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1293 | likely_benign | 0.1169 | benign | -0.495 | Destabilizing | 0.997 | D | 0.46 | neutral | N | 0.476633294 | None | None | N |
S/C | 0.1806 | likely_benign | 0.1637 | benign | -0.707 | Destabilizing | 1.0 | D | 0.814 | deleterious | N | 0.48820709 | None | None | N |
S/D | 0.7326 | likely_pathogenic | 0.7899 | pathogenic | -1.488 | Destabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | N |
S/E | 0.7572 | likely_pathogenic | 0.8171 | pathogenic | -1.445 | Destabilizing | 0.999 | D | 0.485 | neutral | None | None | None | None | N |
S/F | 0.3069 | likely_benign | 0.3162 | benign | -0.711 | Destabilizing | 1.0 | D | 0.875 | deleterious | N | 0.495030718 | None | None | N |
S/G | 0.1476 | likely_benign | 0.1373 | benign | -0.752 | Destabilizing | 0.999 | D | 0.477 | neutral | None | None | None | None | N |
S/H | 0.5393 | ambiguous | 0.5808 | pathogenic | -1.298 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
S/I | 0.4312 | ambiguous | 0.4647 | ambiguous | 0.089 | Stabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
S/K | 0.8988 | likely_pathogenic | 0.9334 | pathogenic | -0.723 | Destabilizing | 0.999 | D | 0.487 | neutral | None | None | None | None | N |
S/L | 0.2226 | likely_benign | 0.2273 | benign | 0.089 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
S/M | 0.3722 | ambiguous | 0.3417 | ambiguous | 0.311 | Stabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
S/N | 0.2748 | likely_benign | 0.3096 | benign | -1.042 | Destabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | N |
S/P | 0.9913 | likely_pathogenic | 0.9942 | pathogenic | -0.072 | Destabilizing | 1.0 | D | 0.832 | deleterious | D | 0.525807951 | None | None | N |
S/Q | 0.719 | likely_pathogenic | 0.7636 | pathogenic | -1.204 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
S/R | 0.829 | likely_pathogenic | 0.8883 | pathogenic | -0.637 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | N |
S/T | 0.1316 | likely_benign | 0.1202 | benign | -0.82 | Destabilizing | 0.999 | D | 0.471 | neutral | D | 0.527682649 | None | None | N |
S/V | 0.4441 | ambiguous | 0.4428 | ambiguous | -0.072 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
S/W | 0.6547 | likely_pathogenic | 0.6803 | pathogenic | -0.842 | Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | N |
S/Y | 0.3076 | likely_benign | 0.3375 | benign | -0.466 | Destabilizing | 1.0 | D | 0.881 | deleterious | N | 0.484635464 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.