Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33424 | 100495;100496;100497 | chr2:178536477;178536476;178536475 | chr2:179401204;179401203;179401202 |
N2AB | 31783 | 95572;95573;95574 | chr2:178536477;178536476;178536475 | chr2:179401204;179401203;179401202 |
N2A | 30856 | 92791;92792;92793 | chr2:178536477;178536476;178536475 | chr2:179401204;179401203;179401202 |
N2B | 24359 | 73300;73301;73302 | chr2:178536477;178536476;178536475 | chr2:179401204;179401203;179401202 |
Novex-1 | 24484 | 73675;73676;73677 | chr2:178536477;178536476;178536475 | chr2:179401204;179401203;179401202 |
Novex-2 | 24551 | 73876;73877;73878 | chr2:178536477;178536476;178536475 | chr2:179401204;179401203;179401202 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs1264517895 | -1.746 | 1.0 | D | 0.835 | 0.543 | 0.564835144235 | gnomAD-2.1.1 | 4.41E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 4.07E-05 | None | 0 | 0 | 0 |
I/F | rs1264517895 | -1.746 | 1.0 | D | 0.835 | 0.543 | 0.564835144235 | gnomAD-4.0.0 | 5.58079E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 9.914E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.969 | likely_pathogenic | 0.9766 | pathogenic | -2.253 | Highly Destabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
I/C | 0.9729 | likely_pathogenic | 0.9781 | pathogenic | -1.2 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | I |
I/D | 0.9955 | likely_pathogenic | 0.9977 | pathogenic | -2.105 | Highly Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
I/E | 0.9849 | likely_pathogenic | 0.9922 | pathogenic | -2.037 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
I/F | 0.8112 | likely_pathogenic | 0.876 | pathogenic | -1.555 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.541653573 | None | None | I |
I/G | 0.9906 | likely_pathogenic | 0.9942 | pathogenic | -2.653 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
I/H | 0.9883 | likely_pathogenic | 0.9933 | pathogenic | -1.932 | Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | I |
I/K | 0.9765 | likely_pathogenic | 0.9872 | pathogenic | -1.703 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | I |
I/L | 0.476 | ambiguous | 0.5146 | ambiguous | -1.17 | Destabilizing | 0.993 | D | 0.433 | neutral | N | 0.487492165 | None | None | I |
I/M | 0.4818 | ambiguous | 0.5325 | ambiguous | -0.75 | Destabilizing | 1.0 | D | 0.804 | deleterious | D | 0.532832163 | None | None | I |
I/N | 0.852 | likely_pathogenic | 0.8922 | pathogenic | -1.589 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.522325231 | None | None | I |
I/P | 0.9475 | likely_pathogenic | 0.9605 | pathogenic | -1.505 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
I/Q | 0.9774 | likely_pathogenic | 0.9875 | pathogenic | -1.71 | Destabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | I |
I/R | 0.9713 | likely_pathogenic | 0.9836 | pathogenic | -1.082 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
I/S | 0.953 | likely_pathogenic | 0.9691 | pathogenic | -2.194 | Highly Destabilizing | 1.0 | D | 0.854 | deleterious | N | 0.521564763 | None | None | I |
I/T | 0.9374 | likely_pathogenic | 0.9486 | pathogenic | -2.009 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.521564763 | None | None | I |
I/V | 0.2357 | likely_benign | 0.2118 | benign | -1.505 | Destabilizing | 0.993 | D | 0.414 | neutral | N | 0.501514768 | None | None | I |
I/W | 0.9925 | likely_pathogenic | 0.9957 | pathogenic | -1.761 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | I |
I/Y | 0.957 | likely_pathogenic | 0.9773 | pathogenic | -1.549 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.