Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33431 | 100516;100517;100518 | chr2:178536456;178536455;178536454 | chr2:179401183;179401182;179401181 |
N2AB | 31790 | 95593;95594;95595 | chr2:178536456;178536455;178536454 | chr2:179401183;179401182;179401181 |
N2A | 30863 | 92812;92813;92814 | chr2:178536456;178536455;178536454 | chr2:179401183;179401182;179401181 |
N2B | 24366 | 73321;73322;73323 | chr2:178536456;178536455;178536454 | chr2:179401183;179401182;179401181 |
Novex-1 | 24491 | 73696;73697;73698 | chr2:178536456;178536455;178536454 | chr2:179401183;179401182;179401181 |
Novex-2 | 24558 | 73897;73898;73899 | chr2:178536456;178536455;178536454 | chr2:179401183;179401182;179401181 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/M | rs369597353 | -1.029 | 0.991 | N | 0.81 | 0.365 | 0.389283895039 | gnomAD-2.1.1 | 4.09E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.37E-05 | None | 0 | 0 | 0 |
K/M | rs369597353 | -1.029 | 0.991 | N | 0.81 | 0.365 | 0.389283895039 | gnomAD-4.0.0 | 1.60731E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45049E-05 | 0 |
K/R | rs369597353 | -0.629 | 0.01 | N | 0.4 | 0.109 | None | gnomAD-2.1.1 | 8.18E-06 | None | None | None | None | N | None | 1.29769E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
K/R | rs369597353 | -0.629 | 0.01 | N | 0.4 | 0.109 | None | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 7.23E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9 | likely_pathogenic | 0.9199 | pathogenic | -1.373 | Destabilizing | 0.648 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/C | 0.8603 | likely_pathogenic | 0.859 | pathogenic | -1.415 | Destabilizing | 0.993 | D | 0.853 | deleterious | None | None | None | None | N |
K/D | 0.9929 | likely_pathogenic | 0.9941 | pathogenic | -2.25 | Highly Destabilizing | 0.866 | D | 0.795 | deleterious | None | None | None | None | N |
K/E | 0.8188 | likely_pathogenic | 0.8654 | pathogenic | -1.918 | Destabilizing | 0.41 | N | 0.657 | neutral | N | 0.500677987 | None | None | N |
K/F | 0.9597 | likely_pathogenic | 0.9609 | pathogenic | -0.687 | Destabilizing | 0.98 | D | 0.868 | deleterious | None | None | None | None | N |
K/G | 0.9412 | likely_pathogenic | 0.9492 | pathogenic | -1.856 | Destabilizing | 0.866 | D | 0.759 | deleterious | None | None | None | None | N |
K/H | 0.785 | likely_pathogenic | 0.7756 | pathogenic | -1.468 | Destabilizing | 0.98 | D | 0.82 | deleterious | None | None | None | None | N |
K/I | 0.741 | likely_pathogenic | 0.7829 | pathogenic | 0.017 | Stabilizing | 0.929 | D | 0.88 | deleterious | None | None | None | None | N |
K/L | 0.7551 | likely_pathogenic | 0.7745 | pathogenic | 0.017 | Stabilizing | 0.866 | D | 0.759 | deleterious | None | None | None | None | N |
K/M | 0.5156 | ambiguous | 0.5512 | ambiguous | -0.396 | Destabilizing | 0.991 | D | 0.81 | deleterious | N | 0.508629954 | None | None | N |
K/N | 0.9539 | likely_pathogenic | 0.962 | pathogenic | -2.001 | Highly Destabilizing | 0.83 | D | 0.789 | deleterious | N | 0.512198877 | None | None | N |
K/P | 0.9984 | likely_pathogenic | 0.9985 | pathogenic | -0.429 | Destabilizing | 0.929 | D | 0.822 | deleterious | None | None | None | None | N |
K/Q | 0.3985 | ambiguous | 0.4403 | ambiguous | -1.572 | Destabilizing | 0.83 | D | 0.789 | deleterious | D | 0.523887408 | None | None | N |
K/R | 0.1354 | likely_benign | 0.1273 | benign | -0.777 | Destabilizing | 0.01 | N | 0.4 | neutral | N | 0.483059506 | None | None | N |
K/S | 0.9394 | likely_pathogenic | 0.9501 | pathogenic | -2.444 | Highly Destabilizing | 0.648 | D | 0.681 | prob.neutral | None | None | None | None | N |
K/T | 0.7568 | likely_pathogenic | 0.8111 | pathogenic | -1.848 | Destabilizing | 0.83 | D | 0.775 | deleterious | N | 0.484433383 | None | None | N |
K/V | 0.7242 | likely_pathogenic | 0.7535 | pathogenic | -0.429 | Destabilizing | 0.866 | D | 0.807 | deleterious | None | None | None | None | N |
K/W | 0.959 | likely_pathogenic | 0.9582 | pathogenic | -0.767 | Destabilizing | 0.993 | D | 0.833 | deleterious | None | None | None | None | N |
K/Y | 0.876 | likely_pathogenic | 0.873 | pathogenic | -0.41 | Destabilizing | 0.929 | D | 0.867 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.