Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33433 | 100522;100523;100524 | chr2:178536450;178536449;178536448 | chr2:179401177;179401176;179401175 |
N2AB | 31792 | 95599;95600;95601 | chr2:178536450;178536449;178536448 | chr2:179401177;179401176;179401175 |
N2A | 30865 | 92818;92819;92820 | chr2:178536450;178536449;178536448 | chr2:179401177;179401176;179401175 |
N2B | 24368 | 73327;73328;73329 | chr2:178536450;178536449;178536448 | chr2:179401177;179401176;179401175 |
Novex-1 | 24493 | 73702;73703;73704 | chr2:178536450;178536449;178536448 | chr2:179401177;179401176;179401175 |
Novex-2 | 24560 | 73903;73904;73905 | chr2:178536450;178536449;178536448 | chr2:179401177;179401176;179401175 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs879015914 | -1.188 | 0.275 | N | 0.186 | 0.038 | 0.289474373501 | gnomAD-2.1.1 | 2.03E-05 | None | None | None | None | N | None | 2.58766E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.67448E-04 |
E/D | rs879015914 | -1.188 | 0.275 | N | 0.186 | 0.038 | 0.289474373501 | gnomAD-3.1.2 | 5.26E-05 | None | None | None | None | N | None | 1.92911E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/D | rs879015914 | -1.188 | 0.275 | N | 0.186 | 0.038 | 0.289474373501 | gnomAD-4.0.0 | 7.4495E-06 | None | None | None | None | N | None | 1.47141E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.60426E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.5595 | ambiguous | 0.5976 | pathogenic | -0.764 | Destabilizing | 0.996 | D | 0.596 | neutral | N | 0.473396701 | None | None | N |
E/C | 0.9653 | likely_pathogenic | 0.9629 | pathogenic | -0.568 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
E/D | 0.4427 | ambiguous | 0.4252 | ambiguous | -1.344 | Destabilizing | 0.275 | N | 0.186 | neutral | N | 0.46145487 | None | None | N |
E/F | 0.9698 | likely_pathogenic | 0.9728 | pathogenic | 0.019 | Stabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | N |
E/G | 0.5363 | ambiguous | 0.5973 | pathogenic | -1.189 | Destabilizing | 0.998 | D | 0.675 | neutral | N | 0.489387815 | None | None | N |
E/H | 0.903 | likely_pathogenic | 0.9026 | pathogenic | -0.337 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
E/I | 0.8348 | likely_pathogenic | 0.8508 | pathogenic | 0.417 | Stabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
E/K | 0.6728 | likely_pathogenic | 0.7395 | pathogenic | -0.959 | Destabilizing | 0.992 | D | 0.509 | neutral | N | 0.477114969 | None | None | N |
E/L | 0.8202 | likely_pathogenic | 0.8408 | pathogenic | 0.417 | Stabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
E/M | 0.8764 | likely_pathogenic | 0.8865 | pathogenic | 0.888 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
E/N | 0.7405 | likely_pathogenic | 0.7534 | pathogenic | -1.499 | Destabilizing | 0.998 | D | 0.671 | neutral | None | None | None | None | N |
E/P | 0.8956 | likely_pathogenic | 0.9229 | pathogenic | 0.045 | Stabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
E/Q | 0.4845 | ambiguous | 0.5234 | ambiguous | -1.282 | Destabilizing | 0.999 | D | 0.63 | neutral | N | 0.472609779 | None | None | N |
E/R | 0.8084 | likely_pathogenic | 0.8411 | pathogenic | -0.64 | Destabilizing | 0.999 | D | 0.736 | prob.delet. | None | None | None | None | N |
E/S | 0.697 | likely_pathogenic | 0.7204 | pathogenic | -1.869 | Destabilizing | 0.994 | D | 0.556 | neutral | None | None | None | None | N |
E/T | 0.7939 | likely_pathogenic | 0.8191 | pathogenic | -1.509 | Destabilizing | 0.999 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/V | 0.6831 | likely_pathogenic | 0.7093 | pathogenic | 0.045 | Stabilizing | 1.0 | D | 0.778 | deleterious | N | 0.479512767 | None | None | N |
E/W | 0.9876 | likely_pathogenic | 0.989 | pathogenic | 0.227 | Stabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | N |
E/Y | 0.9469 | likely_pathogenic | 0.9528 | pathogenic | 0.248 | Stabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.