Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33437 | 100534;100535;100536 | chr2:178536438;178536437;178536436 | chr2:179401165;179401164;179401163 |
N2AB | 31796 | 95611;95612;95613 | chr2:178536438;178536437;178536436 | chr2:179401165;179401164;179401163 |
N2A | 30869 | 92830;92831;92832 | chr2:178536438;178536437;178536436 | chr2:179401165;179401164;179401163 |
N2B | 24372 | 73339;73340;73341 | chr2:178536438;178536437;178536436 | chr2:179401165;179401164;179401163 |
Novex-1 | 24497 | 73714;73715;73716 | chr2:178536438;178536437;178536436 | chr2:179401165;179401164;179401163 |
Novex-2 | 24564 | 73915;73916;73917 | chr2:178536438;178536437;178536436 | chr2:179401165;179401164;179401163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1691532335 | None | 0.925 | N | 0.537 | 0.22 | 0.176091768786 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/S | rs1691532335 | None | 0.925 | N | 0.537 | 0.22 | 0.176091768786 | gnomAD-4.0.0 | 8.98166E-06 | None | None | None | None | N | None | 3.38868E-05 | 0 | None | 0 | 0 | None | 0 | 1.12309E-03 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3106 | likely_benign | 0.2839 | benign | -0.134 | Destabilizing | 0.942 | D | 0.518 | neutral | None | None | None | None | N |
N/C | 0.4248 | ambiguous | 0.3713 | ambiguous | 0.12 | Stabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
N/D | 0.1693 | likely_benign | 0.158 | benign | 0.245 | Stabilizing | 0.98 | D | 0.516 | neutral | N | 0.449603081 | None | None | N |
N/E | 0.3643 | ambiguous | 0.3398 | benign | 0.202 | Stabilizing | 0.985 | D | 0.527 | neutral | None | None | None | None | N |
N/F | 0.7192 | likely_pathogenic | 0.6783 | pathogenic | -0.703 | Destabilizing | 0.999 | D | 0.635 | neutral | None | None | None | None | N |
N/G | 0.2651 | likely_benign | 0.2263 | benign | -0.251 | Destabilizing | 0.092 | N | 0.302 | neutral | None | None | None | None | N |
N/H | 0.1913 | likely_benign | 0.173 | benign | -0.214 | Destabilizing | 0.998 | D | 0.59 | neutral | N | 0.493316572 | None | None | N |
N/I | 0.3505 | ambiguous | 0.3559 | ambiguous | 0.075 | Stabilizing | 0.989 | D | 0.629 | neutral | N | 0.485331807 | None | None | N |
N/K | 0.312 | likely_benign | 0.309 | benign | 0.155 | Stabilizing | 0.98 | D | 0.522 | neutral | N | 0.419106815 | None | None | N |
N/L | 0.3362 | likely_benign | 0.3164 | benign | 0.075 | Stabilizing | 0.991 | D | 0.558 | neutral | None | None | None | None | N |
N/M | 0.4338 | ambiguous | 0.3864 | ambiguous | 0.038 | Stabilizing | 1.0 | D | 0.64 | neutral | None | None | None | None | N |
N/P | 0.6098 | likely_pathogenic | 0.6478 | pathogenic | 0.03 | Stabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | N |
N/Q | 0.3422 | ambiguous | 0.3029 | benign | -0.216 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | N |
N/R | 0.4197 | ambiguous | 0.4061 | ambiguous | 0.222 | Stabilizing | 0.996 | D | 0.586 | neutral | None | None | None | None | N |
N/S | 0.1198 | likely_benign | 0.115 | benign | -0.049 | Destabilizing | 0.925 | D | 0.537 | neutral | N | 0.408697821 | None | None | N |
N/T | 0.2173 | likely_benign | 0.2113 | benign | 0.036 | Stabilizing | 0.248 | N | 0.438 | neutral | N | 0.439135371 | None | None | N |
N/V | 0.37 | ambiguous | 0.3656 | ambiguous | 0.03 | Stabilizing | 0.991 | D | 0.581 | neutral | None | None | None | None | N |
N/W | 0.859 | likely_pathogenic | 0.8305 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
N/Y | 0.2634 | likely_benign | 0.2542 | benign | -0.484 | Destabilizing | 0.998 | D | 0.631 | neutral | N | 0.504013569 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.