Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33443 | 100552;100553;100554 | chr2:178536420;178536419;178536418 | chr2:179401147;179401146;179401145 |
N2AB | 31802 | 95629;95630;95631 | chr2:178536420;178536419;178536418 | chr2:179401147;179401146;179401145 |
N2A | 30875 | 92848;92849;92850 | chr2:178536420;178536419;178536418 | chr2:179401147;179401146;179401145 |
N2B | 24378 | 73357;73358;73359 | chr2:178536420;178536419;178536418 | chr2:179401147;179401146;179401145 |
Novex-1 | 24503 | 73732;73733;73734 | chr2:178536420;178536419;178536418 | chr2:179401147;179401146;179401145 |
Novex-2 | 24570 | 73933;73934;73935 | chr2:178536420;178536419;178536418 | chr2:179401147;179401146;179401145 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/K | None | None | 0.999 | N | 0.692 | 0.429 | 0.476522311808 | gnomAD-4.0.0 | 1.59213E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85936E-06 | 0 | 0 |
T/R | None | None | 0.999 | N | 0.748 | 0.442 | 0.620746667299 | gnomAD-4.0.0 | 1.59213E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85936E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.264 | likely_benign | 0.3237 | benign | -0.677 | Destabilizing | 0.981 | D | 0.469 | neutral | N | 0.462764379 | None | None | I |
T/C | 0.6932 | likely_pathogenic | 0.7198 | pathogenic | -0.472 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
T/D | 0.7995 | likely_pathogenic | 0.8478 | pathogenic | 0.499 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | I |
T/E | 0.8322 | likely_pathogenic | 0.8871 | pathogenic | 0.473 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | None | None | None | None | I |
T/F | 0.7971 | likely_pathogenic | 0.8627 | pathogenic | -1.115 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | I |
T/G | 0.5496 | ambiguous | 0.5777 | pathogenic | -0.849 | Destabilizing | 0.997 | D | 0.598 | neutral | None | None | None | None | I |
T/H | 0.7324 | likely_pathogenic | 0.7864 | pathogenic | -1.117 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
T/I | 0.6504 | likely_pathogenic | 0.7383 | pathogenic | -0.33 | Destabilizing | 0.999 | D | 0.751 | deleterious | N | 0.506957873 | None | None | I |
T/K | 0.7427 | likely_pathogenic | 0.8401 | pathogenic | -0.317 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | N | 0.521156535 | None | None | I |
T/L | 0.4216 | ambiguous | 0.4916 | ambiguous | -0.33 | Destabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | I |
T/M | 0.3198 | likely_benign | 0.376 | ambiguous | -0.257 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | I |
T/N | 0.298 | likely_benign | 0.3132 | benign | -0.259 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | None | None | None | None | I |
T/P | 0.7359 | likely_pathogenic | 0.8181 | pathogenic | -0.416 | Destabilizing | 0.999 | D | 0.753 | deleterious | N | 0.47566488 | None | None | I |
T/Q | 0.704 | likely_pathogenic | 0.7875 | pathogenic | -0.351 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
T/R | 0.6867 | likely_pathogenic | 0.8066 | pathogenic | -0.192 | Destabilizing | 0.999 | D | 0.748 | deleterious | N | 0.506341798 | None | None | I |
T/S | 0.2556 | likely_benign | 0.2553 | benign | -0.554 | Destabilizing | 0.905 | D | 0.403 | neutral | N | 0.469495563 | None | None | I |
T/V | 0.4996 | ambiguous | 0.5757 | pathogenic | -0.416 | Destabilizing | 0.998 | D | 0.556 | neutral | None | None | None | None | I |
T/W | 0.9556 | likely_pathogenic | 0.9715 | pathogenic | -1.093 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
T/Y | 0.8377 | likely_pathogenic | 0.8864 | pathogenic | -0.802 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.