Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33444 | 100555;100556;100557 | chr2:178536417;178536416;178536415 | chr2:179401144;179401143;179401142 |
N2AB | 31803 | 95632;95633;95634 | chr2:178536417;178536416;178536415 | chr2:179401144;179401143;179401142 |
N2A | 30876 | 92851;92852;92853 | chr2:178536417;178536416;178536415 | chr2:179401144;179401143;179401142 |
N2B | 24379 | 73360;73361;73362 | chr2:178536417;178536416;178536415 | chr2:179401144;179401143;179401142 |
Novex-1 | 24504 | 73735;73736;73737 | chr2:178536417;178536416;178536415 | chr2:179401144;179401143;179401142 |
Novex-2 | 24571 | 73936;73937;73938 | chr2:178536417;178536416;178536415 | chr2:179401144;179401143;179401142 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.999 | N | 0.808 | 0.413 | 0.385906861911 | gnomAD-4.0.0 | 6.84354E-07 | None | None | None | None | I | None | 0 | 2.23724E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/K | None | None | 0.999 | N | 0.767 | 0.498 | 0.374076547971 | gnomAD-4.0.0 | 2.05306E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.6987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0921 | likely_benign | 0.0905 | benign | -0.234 | Destabilizing | 0.981 | D | 0.502 | neutral | N | 0.489118687 | None | None | I |
T/C | 0.583 | likely_pathogenic | 0.5555 | ambiguous | -0.455 | Destabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | I |
T/D | 0.3715 | ambiguous | 0.3588 | ambiguous | -0.172 | Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | I |
T/E | 0.3149 | likely_benign | 0.3025 | benign | -0.267 | Destabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | I |
T/F | 0.4709 | ambiguous | 0.4678 | ambiguous | -0.927 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
T/G | 0.234 | likely_benign | 0.2165 | benign | -0.254 | Destabilizing | 0.997 | D | 0.699 | prob.neutral | None | None | None | None | I |
T/H | 0.3619 | ambiguous | 0.3535 | ambiguous | -0.439 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
T/I | 0.3227 | likely_benign | 0.3061 | benign | -0.293 | Destabilizing | 0.999 | D | 0.808 | deleterious | N | 0.497756813 | None | None | I |
T/K | 0.2065 | likely_benign | 0.2136 | benign | -0.373 | Destabilizing | 0.999 | D | 0.767 | deleterious | N | 0.436807142 | None | None | I |
T/L | 0.1684 | likely_benign | 0.1585 | benign | -0.293 | Destabilizing | 0.998 | D | 0.683 | prob.neutral | None | None | None | None | I |
T/M | 0.1514 | likely_benign | 0.1422 | benign | -0.258 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | I |
T/N | 0.1318 | likely_benign | 0.1231 | benign | -0.199 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | I |
T/P | 0.1364 | likely_benign | 0.1323 | benign | -0.254 | Destabilizing | 1.0 | D | 0.81 | deleterious | N | 0.508707312 | None | None | I |
T/Q | 0.2457 | likely_benign | 0.2426 | benign | -0.388 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | I |
T/R | 0.1987 | likely_benign | 0.2132 | benign | -0.143 | Destabilizing | 0.999 | D | 0.809 | deleterious | N | 0.487734607 | None | None | I |
T/S | 0.1151 | likely_benign | 0.1075 | benign | -0.336 | Destabilizing | 0.905 | D | 0.379 | neutral | N | 0.474613381 | None | None | I |
T/V | 0.2206 | likely_benign | 0.2041 | benign | -0.254 | Destabilizing | 0.998 | D | 0.615 | neutral | None | None | None | None | I |
T/W | 0.7633 | likely_pathogenic | 0.79 | pathogenic | -1.027 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
T/Y | 0.4648 | ambiguous | 0.4723 | ambiguous | -0.718 | Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.