Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33445 | 100558;100559;100560 | chr2:178536414;178536413;178536412 | chr2:179401141;179401140;179401139 |
N2AB | 31804 | 95635;95636;95637 | chr2:178536414;178536413;178536412 | chr2:179401141;179401140;179401139 |
N2A | 30877 | 92854;92855;92856 | chr2:178536414;178536413;178536412 | chr2:179401141;179401140;179401139 |
N2B | 24380 | 73363;73364;73365 | chr2:178536414;178536413;178536412 | chr2:179401141;179401140;179401139 |
Novex-1 | 24505 | 73738;73739;73740 | chr2:178536414;178536413;178536412 | chr2:179401141;179401140;179401139 |
Novex-2 | 24572 | 73939;73940;73941 | chr2:178536414;178536413;178536412 | chr2:179401141;179401140;179401139 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs774013465 | -0.712 | 0.001 | N | 0.171 | 0.146 | 0.216624796971 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
E/K | rs774013465 | -0.712 | 0.001 | N | 0.171 | 0.146 | 0.216624796971 | gnomAD-3.1.2 | 1.97E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 6.20347E-04 | 0 |
E/K | rs774013465 | -0.712 | 0.001 | N | 0.171 | 0.146 | 0.216624796971 | gnomAD-4.0.0 | 8.05659E-06 | None | None | None | None | N | None | 1.33337E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.31764E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1914 | likely_benign | 0.2079 | benign | -0.019 | Destabilizing | 0.117 | N | 0.484 | neutral | N | 0.483059506 | None | None | N |
E/C | 0.8862 | likely_pathogenic | 0.9086 | pathogenic | -0.161 | Destabilizing | 0.935 | D | 0.64 | neutral | None | None | None | None | N |
E/D | 0.1071 | likely_benign | 0.0984 | benign | -0.289 | Destabilizing | None | N | 0.13 | neutral | N | 0.423568486 | None | None | N |
E/F | 0.874 | likely_pathogenic | 0.8972 | pathogenic | -0.058 | Destabilizing | 0.791 | D | 0.606 | neutral | None | None | None | None | N |
E/G | 0.1818 | likely_benign | 0.207 | benign | -0.137 | Destabilizing | 0.117 | N | 0.529 | neutral | N | 0.485657094 | None | None | N |
E/H | 0.5786 | likely_pathogenic | 0.6497 | pathogenic | 0.531 | Stabilizing | 0.555 | D | 0.453 | neutral | None | None | None | None | N |
E/I | 0.5885 | likely_pathogenic | 0.5984 | pathogenic | 0.233 | Stabilizing | 0.555 | D | 0.611 | neutral | None | None | None | None | N |
E/K | 0.1795 | likely_benign | 0.2247 | benign | 0.429 | Stabilizing | 0.001 | N | 0.171 | neutral | N | 0.456064906 | None | None | N |
E/L | 0.5869 | likely_pathogenic | 0.629 | pathogenic | 0.233 | Stabilizing | 0.38 | N | 0.591 | neutral | None | None | None | None | N |
E/M | 0.63 | likely_pathogenic | 0.6596 | pathogenic | 0.02 | Stabilizing | 0.935 | D | 0.569 | neutral | None | None | None | None | N |
E/N | 0.2531 | likely_benign | 0.2632 | benign | 0.187 | Stabilizing | 0.081 | N | 0.433 | neutral | None | None | None | None | N |
E/P | 0.8191 | likely_pathogenic | 0.8745 | pathogenic | 0.167 | Stabilizing | 0.555 | D | 0.517 | neutral | None | None | None | None | N |
E/Q | 0.1977 | likely_benign | 0.2294 | benign | 0.201 | Stabilizing | 0.117 | N | 0.462 | neutral | N | 0.486350528 | None | None | N |
E/R | 0.3251 | likely_benign | 0.4157 | ambiguous | 0.654 | Stabilizing | 0.081 | N | 0.475 | neutral | None | None | None | None | N |
E/S | 0.2224 | likely_benign | 0.2359 | benign | 0.049 | Stabilizing | 0.081 | N | 0.439 | neutral | None | None | None | None | N |
E/T | 0.2628 | likely_benign | 0.2785 | benign | 0.153 | Stabilizing | 0.149 | N | 0.5 | neutral | None | None | None | None | N |
E/V | 0.369 | ambiguous | 0.3759 | ambiguous | 0.167 | Stabilizing | 0.484 | N | 0.581 | neutral | N | 0.470572999 | None | None | N |
E/W | 0.9387 | likely_pathogenic | 0.9553 | pathogenic | -0.012 | Destabilizing | 0.935 | D | 0.674 | neutral | None | None | None | None | N |
E/Y | 0.7582 | likely_pathogenic | 0.7947 | pathogenic | 0.166 | Stabilizing | 0.791 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.