Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33450 | 100573;100574;100575 | chr2:178536399;178536398;178536397 | chr2:179401126;179401125;179401124 |
N2AB | 31809 | 95650;95651;95652 | chr2:178536399;178536398;178536397 | chr2:179401126;179401125;179401124 |
N2A | 30882 | 92869;92870;92871 | chr2:178536399;178536398;178536397 | chr2:179401126;179401125;179401124 |
N2B | 24385 | 73378;73379;73380 | chr2:178536399;178536398;178536397 | chr2:179401126;179401125;179401124 |
Novex-1 | 24510 | 73753;73754;73755 | chr2:178536399;178536398;178536397 | chr2:179401126;179401125;179401124 |
Novex-2 | 24577 | 73954;73955;73956 | chr2:178536399;178536398;178536397 | chr2:179401126;179401125;179401124 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | rs1691516796 | None | 1.0 | N | 0.751 | 0.39 | 0.457377140028 | gnomAD-4.0.0 | 1.36857E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.799E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2561 | likely_benign | 0.2803 | benign | -0.712 | Destabilizing | 0.999 | D | 0.667 | neutral | N | 0.485348891 | None | None | N |
T/C | 0.7293 | likely_pathogenic | 0.7133 | pathogenic | -0.469 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
T/D | 0.8102 | likely_pathogenic | 0.8401 | pathogenic | -0.507 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/E | 0.7344 | likely_pathogenic | 0.7901 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
T/F | 0.8402 | likely_pathogenic | 0.8795 | pathogenic | -0.605 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
T/G | 0.6084 | likely_pathogenic | 0.6072 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
T/H | 0.7229 | likely_pathogenic | 0.762 | pathogenic | -1.102 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
T/I | 0.6805 | likely_pathogenic | 0.734 | pathogenic | 0.19 | Stabilizing | 1.0 | D | 0.759 | deleterious | N | 0.510138643 | None | None | N |
T/K | 0.5849 | likely_pathogenic | 0.6658 | pathogenic | -0.3 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
T/L | 0.3227 | likely_benign | 0.3283 | benign | 0.19 | Stabilizing | 0.999 | D | 0.734 | prob.delet. | None | None | None | None | N |
T/M | 0.2035 | likely_benign | 0.2023 | benign | 0.021 | Stabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
T/N | 0.2291 | likely_benign | 0.2446 | benign | -0.788 | Destabilizing | 1.0 | D | 0.751 | deleterious | N | 0.506899158 | None | None | N |
T/P | 0.2962 | likely_benign | 0.3406 | ambiguous | -0.079 | Destabilizing | 1.0 | D | 0.758 | deleterious | N | 0.480651629 | None | None | N |
T/Q | 0.5818 | likely_pathogenic | 0.6202 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.787 | deleterious | None | None | None | None | N |
T/R | 0.5124 | ambiguous | 0.5916 | pathogenic | -0.358 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
T/S | 0.3155 | likely_benign | 0.333 | benign | -1.068 | Destabilizing | 0.999 | D | 0.66 | neutral | N | 0.490006472 | None | None | N |
T/V | 0.5253 | ambiguous | 0.5539 | ambiguous | -0.079 | Destabilizing | 0.999 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/W | 0.9529 | likely_pathogenic | 0.9625 | pathogenic | -0.752 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | N |
T/Y | 0.781 | likely_pathogenic | 0.8268 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.