Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33456 | 100591;100592;100593 | chr2:178536381;178536380;178536379 | chr2:179401108;179401107;179401106 |
N2AB | 31815 | 95668;95669;95670 | chr2:178536381;178536380;178536379 | chr2:179401108;179401107;179401106 |
N2A | 30888 | 92887;92888;92889 | chr2:178536381;178536380;178536379 | chr2:179401108;179401107;179401106 |
N2B | 24391 | 73396;73397;73398 | chr2:178536381;178536380;178536379 | chr2:179401108;179401107;179401106 |
Novex-1 | 24516 | 73771;73772;73773 | chr2:178536381;178536380;178536379 | chr2:179401108;179401107;179401106 |
Novex-2 | 24583 | 73972;73973;73974 | chr2:178536381;178536380;178536379 | chr2:179401108;179401107;179401106 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 0.625 | N | 0.356 | 0.178 | 0.148003135375 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
N/Y | None | None | 0.989 | N | 0.427 | 0.404 | 0.541149246611 | gnomAD-4.0.0 | 1.59152E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02425E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2831 | likely_benign | 0.2352 | benign | -0.139 | Destabilizing | 0.525 | D | 0.366 | neutral | None | None | None | None | I |
N/C | 0.3644 | ambiguous | 0.2899 | benign | 0.264 | Stabilizing | 0.998 | D | 0.467 | neutral | None | None | None | None | I |
N/D | 0.1136 | likely_benign | 0.1034 | benign | 0.183 | Stabilizing | 0.012 | N | 0.142 | neutral | N | 0.415661078 | None | None | I |
N/E | 0.3341 | likely_benign | 0.3122 | benign | 0.131 | Stabilizing | 0.728 | D | 0.321 | neutral | None | None | None | None | I |
N/F | 0.6506 | likely_pathogenic | 0.5637 | ambiguous | -0.658 | Destabilizing | 0.991 | D | 0.464 | neutral | None | None | None | None | I |
N/G | 0.2108 | likely_benign | 0.1655 | benign | -0.262 | Destabilizing | 0.002 | N | 0.115 | neutral | None | None | None | None | I |
N/H | 0.1363 | likely_benign | 0.125 | benign | -0.263 | Destabilizing | 0.989 | D | 0.388 | neutral | N | 0.491759134 | None | None | I |
N/I | 0.4289 | ambiguous | 0.3665 | ambiguous | 0.09 | Stabilizing | 0.966 | D | 0.469 | neutral | N | 0.490655263 | None | None | I |
N/K | 0.3105 | likely_benign | 0.3075 | benign | 0.144 | Stabilizing | 0.801 | D | 0.345 | neutral | N | 0.415933224 | None | None | I |
N/L | 0.3909 | ambiguous | 0.3329 | benign | 0.09 | Stabilizing | 0.974 | D | 0.475 | neutral | None | None | None | None | I |
N/M | 0.4557 | ambiguous | 0.3767 | ambiguous | 0.197 | Stabilizing | 0.998 | D | 0.412 | neutral | None | None | None | None | I |
N/P | 0.7941 | likely_pathogenic | 0.7833 | pathogenic | 0.038 | Stabilizing | 0.974 | D | 0.44 | neutral | None | None | None | None | I |
N/Q | 0.3193 | likely_benign | 0.2892 | benign | -0.208 | Destabilizing | 0.974 | D | 0.387 | neutral | None | None | None | None | I |
N/R | 0.4178 | ambiguous | 0.3895 | ambiguous | 0.21 | Stabilizing | 0.974 | D | 0.379 | neutral | None | None | None | None | I |
N/S | 0.1111 | likely_benign | 0.0978 | benign | -0.002 | Destabilizing | 0.625 | D | 0.356 | neutral | N | 0.482099501 | None | None | I |
N/T | 0.179 | likely_benign | 0.1479 | benign | 0.07 | Stabilizing | 0.891 | D | 0.323 | neutral | D | 0.523716837 | None | None | I |
N/V | 0.4171 | ambiguous | 0.3531 | ambiguous | 0.038 | Stabilizing | 0.974 | D | 0.471 | neutral | None | None | None | None | I |
N/W | 0.8121 | likely_pathogenic | 0.758 | pathogenic | -0.749 | Destabilizing | 0.998 | D | 0.566 | neutral | None | None | None | None | I |
N/Y | 0.1981 | likely_benign | 0.1745 | benign | -0.438 | Destabilizing | 0.989 | D | 0.427 | neutral | N | 0.478880884 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.