Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33460 | 100603;100604;100605 | chr2:178536369;178536368;178536367 | chr2:179401096;179401095;179401094 |
N2AB | 31819 | 95680;95681;95682 | chr2:178536369;178536368;178536367 | chr2:179401096;179401095;179401094 |
N2A | 30892 | 92899;92900;92901 | chr2:178536369;178536368;178536367 | chr2:179401096;179401095;179401094 |
N2B | 24395 | 73408;73409;73410 | chr2:178536369;178536368;178536367 | chr2:179401096;179401095;179401094 |
Novex-1 | 24520 | 73783;73784;73785 | chr2:178536369;178536368;178536367 | chr2:179401096;179401095;179401094 |
Novex-2 | 24587 | 73984;73985;73986 | chr2:178536369;178536368;178536367 | chr2:179401096;179401095;179401094 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs1691502761 | None | 0.153 | N | 0.603 | 0.319 | 0.177238962908 | gnomAD-4.0.0 | 1.59153E-06 | None | None | None | None | N | None | 5.65803E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/S | rs1177814135 | None | 0.978 | N | 0.79 | 0.393 | 0.32306181527 | gnomAD-4.0.0 | 3.18305E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43299E-05 | 3.0248E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4375 | ambiguous | 0.4458 | ambiguous | -0.494 | Destabilizing | 0.961 | D | 0.716 | prob.delet. | N | 0.482798585 | None | None | N |
G/C | 0.4741 | ambiguous | 0.5098 | ambiguous | -0.931 | Destabilizing | 1.0 | D | 0.858 | deleterious | D | 0.532391317 | None | None | N |
G/D | 0.2496 | likely_benign | 0.2817 | benign | -1.032 | Destabilizing | 0.153 | N | 0.603 | neutral | N | 0.485990742 | None | None | N |
G/E | 0.4131 | ambiguous | 0.4606 | ambiguous | -1.164 | Destabilizing | 0.983 | D | 0.857 | deleterious | None | None | None | None | N |
G/F | 0.864 | likely_pathogenic | 0.8655 | pathogenic | -1.033 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
G/H | 0.6956 | likely_pathogenic | 0.7044 | pathogenic | -0.827 | Destabilizing | 0.999 | D | 0.856 | deleterious | None | None | None | None | N |
G/I | 0.7709 | likely_pathogenic | 0.8175 | pathogenic | -0.459 | Destabilizing | 0.999 | D | 0.875 | deleterious | None | None | None | None | N |
G/K | 0.7654 | likely_pathogenic | 0.8058 | pathogenic | -1.245 | Destabilizing | 0.991 | D | 0.871 | deleterious | None | None | None | None | N |
G/L | 0.8365 | likely_pathogenic | 0.8363 | pathogenic | -0.459 | Destabilizing | 0.996 | D | 0.865 | deleterious | None | None | None | None | N |
G/M | 0.8384 | likely_pathogenic | 0.8338 | pathogenic | -0.489 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
G/N | 0.3115 | likely_benign | 0.3058 | benign | -0.854 | Destabilizing | 0.983 | D | 0.83 | deleterious | None | None | None | None | N |
G/P | 0.9814 | likely_pathogenic | 0.9813 | pathogenic | -0.434 | Destabilizing | 0.996 | D | 0.877 | deleterious | None | None | None | None | N |
G/Q | 0.6437 | likely_pathogenic | 0.6635 | pathogenic | -1.129 | Destabilizing | 0.991 | D | 0.885 | deleterious | None | None | None | None | N |
G/R | 0.6961 | likely_pathogenic | 0.7623 | pathogenic | -0.732 | Destabilizing | 0.989 | D | 0.887 | deleterious | N | 0.513019614 | None | None | N |
G/S | 0.2243 | likely_benign | 0.2243 | benign | -0.984 | Destabilizing | 0.978 | D | 0.79 | deleterious | N | 0.484747142 | None | None | N |
G/T | 0.482 | ambiguous | 0.4974 | ambiguous | -1.051 | Destabilizing | 0.991 | D | 0.87 | deleterious | None | None | None | None | N |
G/V | 0.6538 | likely_pathogenic | 0.7125 | pathogenic | -0.434 | Destabilizing | 0.994 | D | 0.87 | deleterious | D | 0.531884338 | None | None | N |
G/W | 0.7751 | likely_pathogenic | 0.8118 | pathogenic | -1.251 | Destabilizing | 1.0 | D | 0.858 | deleterious | None | None | None | None | N |
G/Y | 0.7215 | likely_pathogenic | 0.738 | pathogenic | -0.907 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.