Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33470 | 100633;100634;100635 | chr2:178536339;178536338;178536337 | chr2:179401066;179401065;179401064 |
N2AB | 31829 | 95710;95711;95712 | chr2:178536339;178536338;178536337 | chr2:179401066;179401065;179401064 |
N2A | 30902 | 92929;92930;92931 | chr2:178536339;178536338;178536337 | chr2:179401066;179401065;179401064 |
N2B | 24405 | 73438;73439;73440 | chr2:178536339;178536338;178536337 | chr2:179401066;179401065;179401064 |
Novex-1 | 24530 | 73813;73814;73815 | chr2:178536339;178536338;178536337 | chr2:179401066;179401065;179401064 |
Novex-2 | 24597 | 74014;74015;74016 | chr2:178536339;178536338;178536337 | chr2:179401066;179401065;179401064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | 0.999 | N | 0.489 | 0.342 | 0.442977140156 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
E/K | None | None | 0.999 | N | 0.583 | 0.391 | 0.3349148499 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4059 | ambiguous | 0.3715 | ambiguous | -0.902 | Destabilizing | 0.999 | D | 0.711 | prob.delet. | N | 0.499258323 | None | None | I |
E/C | 0.9374 | likely_pathogenic | 0.9287 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
E/D | 0.5812 | likely_pathogenic | 0.4925 | ambiguous | -1.596 | Destabilizing | 0.999 | D | 0.489 | neutral | N | 0.486510525 | None | None | I |
E/F | 0.9149 | likely_pathogenic | 0.9041 | pathogenic | -0.911 | Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | I |
E/G | 0.5406 | ambiguous | 0.5126 | ambiguous | -1.265 | Destabilizing | 1.0 | D | 0.785 | deleterious | N | 0.486510525 | None | None | I |
E/H | 0.8279 | likely_pathogenic | 0.8183 | pathogenic | -1.227 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | I |
E/I | 0.5929 | likely_pathogenic | 0.5507 | ambiguous | 0.089 | Stabilizing | 1.0 | D | 0.897 | deleterious | None | None | None | None | I |
E/K | 0.3807 | ambiguous | 0.3911 | ambiguous | -1.074 | Destabilizing | 0.999 | D | 0.583 | neutral | N | 0.508571239 | None | None | I |
E/L | 0.7704 | likely_pathogenic | 0.7278 | pathogenic | 0.089 | Stabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | I |
E/M | 0.7474 | likely_pathogenic | 0.7098 | pathogenic | 0.627 | Stabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
E/N | 0.7234 | likely_pathogenic | 0.6548 | pathogenic | -1.355 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
E/P | 0.9944 | likely_pathogenic | 0.9943 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
E/Q | 0.2524 | likely_benign | 0.2451 | benign | -1.185 | Destabilizing | 1.0 | D | 0.644 | neutral | N | 0.511014112 | None | None | I |
E/R | 0.5362 | ambiguous | 0.5715 | pathogenic | -1.009 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
E/S | 0.5055 | ambiguous | 0.4551 | ambiguous | -1.825 | Destabilizing | 0.999 | D | 0.631 | neutral | None | None | None | None | I |
E/T | 0.5078 | ambiguous | 0.4658 | ambiguous | -1.503 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
E/V | 0.4203 | ambiguous | 0.3786 | ambiguous | -0.221 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.392007854 | None | None | I |
E/W | 0.9785 | likely_pathogenic | 0.9785 | pathogenic | -0.989 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
E/Y | 0.909 | likely_pathogenic | 0.8987 | pathogenic | -0.728 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.