Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33477 | 100654;100655;100656 | chr2:178536318;178536317;178536316 | chr2:179401045;179401044;179401043 |
N2AB | 31836 | 95731;95732;95733 | chr2:178536318;178536317;178536316 | chr2:179401045;179401044;179401043 |
N2A | 30909 | 92950;92951;92952 | chr2:178536318;178536317;178536316 | chr2:179401045;179401044;179401043 |
N2B | 24412 | 73459;73460;73461 | chr2:178536318;178536317;178536316 | chr2:179401045;179401044;179401043 |
Novex-1 | 24537 | 73834;73835;73836 | chr2:178536318;178536317;178536316 | chr2:179401045;179401044;179401043 |
Novex-2 | 24604 | 74035;74036;74037 | chr2:178536318;178536317;178536316 | chr2:179401045;179401044;179401043 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs794729556 | None | 0.997 | N | 0.669 | 0.227 | 0.273070737957 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs794729556 | None | 0.997 | N | 0.669 | 0.227 | 0.273070737957 | gnomAD-4.0.0 | 6.57022E-06 | None | None | None | None | I | None | 2.41196E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1548 | likely_benign | 0.1587 | benign | -0.57 | Destabilizing | 0.989 | D | 0.635 | neutral | N | 0.509264673 | None | None | I |
E/C | 0.8439 | likely_pathogenic | 0.8318 | pathogenic | -0.15 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
E/D | 0.093 | likely_benign | 0.0763 | benign | -0.462 | Destabilizing | 0.054 | N | 0.203 | neutral | N | 0.475210814 | None | None | I |
E/F | 0.7716 | likely_pathogenic | 0.7602 | pathogenic | -0.331 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
E/G | 0.1729 | likely_benign | 0.1815 | benign | -0.791 | Destabilizing | 0.978 | D | 0.637 | neutral | N | 0.47184931 | None | None | I |
E/H | 0.5774 | likely_pathogenic | 0.5646 | pathogenic | -0.126 | Destabilizing | 1.0 | D | 0.643 | neutral | None | None | None | None | I |
E/I | 0.3495 | ambiguous | 0.3334 | benign | -0.01 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | I |
E/K | 0.1865 | likely_benign | 0.2247 | benign | 0.159 | Stabilizing | 0.978 | D | 0.605 | neutral | N | 0.488428041 | None | None | I |
E/L | 0.4072 | ambiguous | 0.3945 | ambiguous | -0.01 | Destabilizing | 0.998 | D | 0.747 | deleterious | None | None | None | None | I |
E/M | 0.5288 | ambiguous | 0.5043 | ambiguous | 0.162 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | I |
E/N | 0.2213 | likely_benign | 0.1965 | benign | -0.215 | Destabilizing | 0.995 | D | 0.673 | neutral | None | None | None | None | I |
E/P | 0.4249 | ambiguous | 0.4755 | ambiguous | -0.177 | Destabilizing | 0.999 | D | 0.698 | prob.neutral | None | None | None | None | I |
E/Q | 0.197 | likely_benign | 0.1988 | benign | -0.166 | Destabilizing | 0.997 | D | 0.669 | neutral | N | 0.507821878 | None | None | I |
E/R | 0.3313 | likely_benign | 0.3914 | ambiguous | 0.419 | Stabilizing | 0.998 | D | 0.679 | prob.neutral | None | None | None | None | I |
E/S | 0.1864 | likely_benign | 0.1775 | benign | -0.39 | Destabilizing | 0.983 | D | 0.608 | neutral | None | None | None | None | I |
E/T | 0.2246 | likely_benign | 0.2127 | benign | -0.205 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | I |
E/V | 0.2271 | likely_benign | 0.2168 | benign | -0.177 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | N | 0.4751939 | None | None | I |
E/W | 0.9197 | likely_pathogenic | 0.9234 | pathogenic | -0.116 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
E/Y | 0.6628 | likely_pathogenic | 0.6537 | pathogenic | -0.074 | Destabilizing | 1.0 | D | 0.744 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.