Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3348 | 10267;10268;10269 | chr2:178764249;178764248;178764247 | chr2:179628976;179628975;179628974 |
N2AB | 3348 | 10267;10268;10269 | chr2:178764249;178764248;178764247 | chr2:179628976;179628975;179628974 |
N2A | 3348 | 10267;10268;10269 | chr2:178764249;178764248;178764247 | chr2:179628976;179628975;179628974 |
N2B | 3302 | 10129;10130;10131 | chr2:178764249;178764248;178764247 | chr2:179628976;179628975;179628974 |
Novex-1 | 3302 | 10129;10130;10131 | chr2:178764249;178764248;178764247 | chr2:179628976;179628975;179628974 |
Novex-2 | 3302 | 10129;10130;10131 | chr2:178764249;178764248;178764247 | chr2:179628976;179628975;179628974 |
Novex-3 | 3348 | 10267;10268;10269 | chr2:178764249;178764248;178764247 | chr2:179628976;179628975;179628974 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.062 | N | 0.314 | 0.231 | 0.722308813073 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.387 | ambiguous | 0.4683 | ambiguous | -1.212 | Destabilizing | 0.035 | N | 0.306 | neutral | None | None | None | None | I |
I/C | 0.788 | likely_pathogenic | 0.7326 | pathogenic | -0.765 | Destabilizing | 0.824 | D | 0.325 | neutral | None | None | None | None | I |
I/D | 0.732 | likely_pathogenic | 0.7912 | pathogenic | -0.655 | Destabilizing | 0.555 | D | 0.377 | neutral | None | None | None | None | I |
I/E | 0.5388 | ambiguous | 0.6414 | pathogenic | -0.731 | Destabilizing | 0.555 | D | 0.374 | neutral | None | None | None | None | I |
I/F | 0.1843 | likely_benign | 0.2111 | benign | -1.032 | Destabilizing | 0.317 | N | 0.307 | neutral | D | 0.622766937 | None | None | I |
I/G | 0.7204 | likely_pathogenic | 0.7615 | pathogenic | -1.424 | Destabilizing | 0.262 | N | 0.382 | neutral | None | None | None | None | I |
I/H | 0.5269 | ambiguous | 0.5641 | pathogenic | -0.558 | Destabilizing | 0.935 | D | 0.312 | neutral | None | None | None | None | I |
I/K | 0.4343 | ambiguous | 0.5065 | ambiguous | -0.729 | Destabilizing | 0.555 | D | 0.379 | neutral | None | None | None | None | I |
I/L | 0.103 | likely_benign | 0.1187 | benign | -0.751 | Destabilizing | None | N | 0.092 | neutral | N | 0.472726605 | None | None | I |
I/M | 0.1105 | likely_benign | 0.1265 | benign | -0.546 | Destabilizing | 0.317 | N | 0.347 | neutral | N | 0.521530718 | None | None | I |
I/N | 0.3334 | likely_benign | 0.402 | ambiguous | -0.515 | Destabilizing | 0.484 | N | 0.367 | neutral | D | 0.548951751 | None | None | I |
I/P | 0.9001 | likely_pathogenic | 0.8956 | pathogenic | -0.871 | Destabilizing | 0.791 | D | 0.367 | neutral | None | None | None | None | I |
I/Q | 0.426 | ambiguous | 0.5115 | ambiguous | -0.799 | Destabilizing | 0.791 | D | 0.343 | neutral | None | None | None | None | I |
I/R | 0.3472 | ambiguous | 0.3967 | ambiguous | -0.039 | Destabilizing | 0.555 | D | 0.366 | neutral | None | None | None | None | I |
I/S | 0.3527 | ambiguous | 0.4175 | ambiguous | -1.031 | Destabilizing | 0.062 | N | 0.314 | neutral | N | 0.504515433 | None | None | I |
I/T | 0.2452 | likely_benign | 0.3021 | benign | -1.004 | Destabilizing | 0.002 | N | 0.141 | neutral | N | 0.470658997 | None | None | I |
I/V | 0.0781 | likely_benign | 0.0778 | benign | -0.871 | Destabilizing | None | N | 0.127 | neutral | N | 0.448989289 | None | None | I |
I/W | 0.8232 | likely_pathogenic | 0.8286 | pathogenic | -1.0 | Destabilizing | 0.935 | D | 0.365 | neutral | None | None | None | None | I |
I/Y | 0.5394 | ambiguous | 0.5537 | ambiguous | -0.79 | Destabilizing | 0.555 | D | 0.367 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.