Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33483 | 100672;100673;100674 | chr2:178536300;178536299;178536298 | chr2:179401027;179401026;179401025 |
N2AB | 31842 | 95749;95750;95751 | chr2:178536300;178536299;178536298 | chr2:179401027;179401026;179401025 |
N2A | 30915 | 92968;92969;92970 | chr2:178536300;178536299;178536298 | chr2:179401027;179401026;179401025 |
N2B | 24418 | 73477;73478;73479 | chr2:178536300;178536299;178536298 | chr2:179401027;179401026;179401025 |
Novex-1 | 24543 | 73852;73853;73854 | chr2:178536300;178536299;178536298 | chr2:179401027;179401026;179401025 |
Novex-2 | 24610 | 74053;74054;74055 | chr2:178536300;178536299;178536298 | chr2:179401027;179401026;179401025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs762690616 | -0.059 | 0.001 | N | 0.093 | 0.092 | 0.12205267543 | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 9.81E-05 | None | 0 | 8.88E-06 | 0 |
E/D | rs762690616 | -0.059 | 0.001 | N | 0.093 | 0.092 | 0.12205267543 | gnomAD-4.0.0 | 1.84754E-05 | None | None | None | None | N | None | 2.98811E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52914E-05 | 9.27665E-05 | 1.65695E-05 |
E/K | rs368321767 | None | 0.335 | N | 0.399 | 0.193 | 0.218112801441 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/K | rs368321767 | None | 0.335 | N | 0.399 | 0.193 | 0.218112801441 | gnomAD-4.0.0 | 6.57117E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
E/Q | rs368321767 | 0.335 | 0.013 | N | 0.235 | 0.065 | None | gnomAD-2.1.1 | 1.92966E-04 | None | None | None | None | N | None | 0 | 5.67E-05 | None | 0 | 0 | None | 9.82E-05 | None | 4E-05 | 3.5951E-04 | 2.81532E-04 |
E/Q | rs368321767 | 0.335 | 0.013 | N | 0.235 | 0.065 | None | gnomAD-3.1.2 | 1.7085E-04 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 3.52765E-04 | 0 | 4.78011E-04 |
E/Q | rs368321767 | 0.335 | 0.013 | N | 0.235 | 0.065 | None | gnomAD-4.0.0 | 3.03677E-04 | None | None | None | None | N | None | 4.00491E-05 | 5.00317E-05 | None | 0 | 0 | None | 6.25489E-05 | 0 | 3.89064E-04 | 5.49016E-05 | 2.56221E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1369 | likely_benign | 0.1214 | benign | -0.313 | Destabilizing | 0.013 | N | 0.297 | neutral | N | 0.482806003 | None | None | N |
E/C | 0.8167 | likely_pathogenic | 0.77 | pathogenic | -0.149 | Destabilizing | 0.991 | D | 0.475 | neutral | None | None | None | None | N |
E/D | 0.0936 | likely_benign | 0.0712 | benign | -0.287 | Destabilizing | 0.001 | N | 0.093 | neutral | N | 0.417949235 | None | None | N |
E/F | 0.7169 | likely_pathogenic | 0.6678 | pathogenic | -0.168 | Destabilizing | 0.966 | D | 0.485 | neutral | None | None | None | None | N |
E/G | 0.1603 | likely_benign | 0.1479 | benign | -0.502 | Destabilizing | 0.501 | D | 0.415 | neutral | N | 0.500103685 | None | None | N |
E/H | 0.4699 | ambiguous | 0.4118 | ambiguous | 0.163 | Stabilizing | 0.905 | D | 0.316 | neutral | None | None | None | None | N |
E/I | 0.3274 | likely_benign | 0.2706 | benign | 0.15 | Stabilizing | 0.905 | D | 0.522 | neutral | None | None | None | None | N |
E/K | 0.144 | likely_benign | 0.1418 | benign | 0.233 | Stabilizing | 0.335 | N | 0.399 | neutral | N | 0.47191700599999997 | None | None | N |
E/L | 0.3453 | ambiguous | 0.2841 | benign | 0.15 | Stabilizing | 0.571 | D | 0.471 | neutral | None | None | None | None | N |
E/M | 0.4608 | ambiguous | 0.3953 | ambiguous | 0.134 | Stabilizing | 0.973 | D | 0.437 | neutral | None | None | None | None | N |
E/N | 0.2042 | likely_benign | 0.1612 | benign | -0.057 | Destabilizing | 0.4 | N | 0.378 | neutral | None | None | None | None | N |
E/P | 0.3647 | ambiguous | 0.3396 | benign | 0.016 | Stabilizing | 0.905 | D | 0.401 | neutral | None | None | None | None | N |
E/Q | 0.1522 | likely_benign | 0.1338 | benign | -0.013 | Destabilizing | 0.013 | N | 0.235 | neutral | N | 0.484499514 | None | None | N |
E/R | 0.2713 | likely_benign | 0.2776 | benign | 0.495 | Stabilizing | 0.4 | N | 0.371 | neutral | None | None | None | None | N |
E/S | 0.1627 | likely_benign | 0.1378 | benign | -0.23 | Destabilizing | 0.216 | N | 0.327 | neutral | None | None | None | None | N |
E/T | 0.204 | likely_benign | 0.1675 | benign | -0.074 | Destabilizing | 0.571 | D | 0.32 | neutral | None | None | None | None | N |
E/V | 0.2055 | likely_benign | 0.1755 | benign | 0.016 | Stabilizing | 0.501 | D | 0.43 | neutral | N | 0.471511574 | None | None | N |
E/W | 0.9039 | likely_pathogenic | 0.8849 | pathogenic | -0.03 | Destabilizing | 0.991 | D | 0.557 | neutral | None | None | None | None | N |
E/Y | 0.5847 | likely_pathogenic | 0.5314 | ambiguous | 0.066 | Stabilizing | 0.966 | D | 0.471 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.