Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33484 | 100675;100676;100677 | chr2:178536297;178536296;178536295 | chr2:179401024;179401023;179401022 |
N2AB | 31843 | 95752;95753;95754 | chr2:178536297;178536296;178536295 | chr2:179401024;179401023;179401022 |
N2A | 30916 | 92971;92972;92973 | chr2:178536297;178536296;178536295 | chr2:179401024;179401023;179401022 |
N2B | 24419 | 73480;73481;73482 | chr2:178536297;178536296;178536295 | chr2:179401024;179401023;179401022 |
Novex-1 | 24544 | 73855;73856;73857 | chr2:178536297;178536296;178536295 | chr2:179401024;179401023;179401022 |
Novex-2 | 24611 | 74056;74057;74058 | chr2:178536297;178536296;178536295 | chr2:179401024;179401023;179401022 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.983 | N | 0.729 | 0.228 | 0.294206760003 | gnomAD-4.0.0 | 1.59167E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43316E-05 | 0 |
P/R | rs1235877834 | -0.204 | 0.999 | N | 0.922 | 0.411 | 0.443999229985 | gnomAD-2.1.1 | 1.07E-05 | None | None | None | None | N | None | 1.24141E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/R | rs1235877834 | -0.204 | 0.999 | N | 0.922 | 0.411 | 0.443999229985 | gnomAD-3.1.2 | 2.63E-05 | None | None | None | None | N | None | 9.66E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/R | rs1235877834 | -0.204 | 0.999 | N | 0.922 | 0.411 | 0.443999229985 | gnomAD-4.0.0 | 7.68852E-06 | None | None | None | None | N | None | 1.01526E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs772916996 | -0.926 | 0.911 | N | 0.397 | 0.218 | 0.264081493735 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs772916996 | -0.926 | 0.911 | N | 0.397 | 0.218 | 0.264081493735 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/S | rs772916996 | -0.926 | 0.911 | N | 0.397 | 0.218 | 0.264081493735 | gnomAD-4.0.0 | 3.84421E-06 | None | None | None | None | N | None | 3.38341E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 2.39325E-06 | 0 | 0 |
P/T | rs772916996 | None | 0.995 | N | 0.832 | 0.317 | 0.335910606209 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs772916996 | None | 0.995 | N | 0.832 | 0.317 | 0.335910606209 | gnomAD-4.0.0 | 6.57358E-06 | None | None | None | None | N | None | 2.41359E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0627 | likely_benign | 0.0529 | benign | -1.14 | Destabilizing | 0.983 | D | 0.729 | deleterious | N | 0.501543693 | None | None | N |
P/C | 0.4041 | ambiguous | 0.3061 | benign | -0.805 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
P/D | 0.496 | ambiguous | 0.4244 | ambiguous | -0.878 | Destabilizing | 0.998 | D | 0.84 | deleterious | None | None | None | None | N |
P/E | 0.3434 | ambiguous | 0.2984 | benign | -0.94 | Destabilizing | 0.998 | D | 0.827 | deleterious | None | None | None | None | N |
P/F | 0.4438 | ambiguous | 0.3688 | ambiguous | -1.01 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
P/G | 0.2607 | likely_benign | 0.219 | benign | -1.378 | Destabilizing | 0.993 | D | 0.822 | deleterious | None | None | None | None | N |
P/H | 0.2592 | likely_benign | 0.2146 | benign | -0.859 | Destabilizing | 1.0 | D | 0.869 | deleterious | N | 0.484251892 | None | None | N |
P/I | 0.2447 | likely_benign | 0.1995 | benign | -0.623 | Destabilizing | 0.999 | D | 0.919 | deleterious | None | None | None | None | N |
P/K | 0.3637 | ambiguous | 0.3265 | benign | -0.965 | Destabilizing | 0.998 | D | 0.819 | deleterious | None | None | None | None | N |
P/L | 0.1402 | likely_benign | 0.1252 | benign | -0.623 | Destabilizing | 0.999 | D | 0.881 | deleterious | N | 0.516185071 | None | None | N |
P/M | 0.2975 | likely_benign | 0.2349 | benign | -0.491 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
P/N | 0.3069 | likely_benign | 0.2374 | benign | -0.681 | Destabilizing | 0.998 | D | 0.908 | deleterious | None | None | None | None | N |
P/Q | 0.2083 | likely_benign | 0.1764 | benign | -0.925 | Destabilizing | 0.999 | D | 0.895 | deleterious | None | None | None | None | N |
P/R | 0.2635 | likely_benign | 0.251 | benign | -0.374 | Destabilizing | 0.999 | D | 0.922 | deleterious | N | 0.487619253 | None | None | N |
P/S | 0.1166 | likely_benign | 0.0954 | benign | -1.131 | Destabilizing | 0.911 | D | 0.397 | neutral | N | 0.477437469 | None | None | N |
P/T | 0.095 | likely_benign | 0.0818 | benign | -1.092 | Destabilizing | 0.995 | D | 0.832 | deleterious | N | 0.516494502 | None | None | N |
P/V | 0.1843 | likely_benign | 0.1458 | benign | -0.759 | Destabilizing | 0.999 | D | 0.882 | deleterious | None | None | None | None | N |
P/W | 0.7004 | likely_pathogenic | 0.6374 | pathogenic | -1.106 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
P/Y | 0.4583 | ambiguous | 0.3848 | ambiguous | -0.839 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.