Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33488 | 100687;100688;100689 | chr2:178536285;178536284;178536283 | chr2:179401012;179401011;179401010 |
N2AB | 31847 | 95764;95765;95766 | chr2:178536285;178536284;178536283 | chr2:179401012;179401011;179401010 |
N2A | 30920 | 92983;92984;92985 | chr2:178536285;178536284;178536283 | chr2:179401012;179401011;179401010 |
N2B | 24423 | 73492;73493;73494 | chr2:178536285;178536284;178536283 | chr2:179401012;179401011;179401010 |
Novex-1 | 24548 | 73867;73868;73869 | chr2:178536285;178536284;178536283 | chr2:179401012;179401011;179401010 |
Novex-2 | 24615 | 74068;74069;74070 | chr2:178536285;178536284;178536283 | chr2:179401012;179401011;179401010 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | rs1415630189 | None | 0.003 | N | 0.305 | 0.089 | 0.222439326576 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3481 | ambiguous | 0.3417 | ambiguous | -0.152 | Destabilizing | 0.359 | N | 0.513 | neutral | None | None | None | None | N |
K/C | 0.695 | likely_pathogenic | 0.6436 | pathogenic | -0.25 | Destabilizing | 0.989 | D | 0.853 | deleterious | None | None | None | None | N |
K/D | 0.7451 | likely_pathogenic | 0.7774 | pathogenic | 0.089 | Stabilizing | 0.797 | D | 0.432 | neutral | None | None | None | None | N |
K/E | 0.2618 | likely_benign | 0.2639 | benign | 0.135 | Stabilizing | 0.297 | N | 0.487 | neutral | N | 0.495463082 | None | None | N |
K/F | 0.7925 | likely_pathogenic | 0.78 | pathogenic | -0.121 | Destabilizing | 0.989 | D | 0.785 | deleterious | None | None | None | None | N |
K/G | 0.5287 | ambiguous | 0.5427 | ambiguous | -0.437 | Destabilizing | 0.528 | D | 0.479 | neutral | None | None | None | None | N |
K/H | 0.4051 | ambiguous | 0.3816 | ambiguous | -0.815 | Destabilizing | 0.937 | D | 0.497 | neutral | None | None | None | None | N |
K/I | 0.3204 | likely_benign | 0.322 | benign | 0.54 | Stabilizing | 0.857 | D | 0.838 | deleterious | N | 0.465680338 | None | None | N |
K/L | 0.3975 | ambiguous | 0.3827 | ambiguous | 0.54 | Stabilizing | 0.528 | D | 0.479 | neutral | None | None | None | None | N |
K/M | 0.3121 | likely_benign | 0.3009 | benign | 0.373 | Stabilizing | 0.968 | D | 0.495 | neutral | None | None | None | None | N |
K/N | 0.5472 | ambiguous | 0.5794 | pathogenic | 0.025 | Stabilizing | 0.747 | D | 0.472 | neutral | N | 0.514379704 | None | None | N |
K/P | 0.8702 | likely_pathogenic | 0.8898 | pathogenic | 0.34 | Stabilizing | 0.888 | D | 0.531 | neutral | None | None | None | None | N |
K/Q | 0.1484 | likely_benign | 0.1382 | benign | -0.121 | Destabilizing | 0.006 | N | 0.255 | neutral | N | 0.485595592 | None | None | N |
K/R | 0.0932 | likely_benign | 0.0893 | benign | -0.298 | Destabilizing | 0.003 | N | 0.305 | neutral | N | 0.484230155 | None | None | N |
K/S | 0.4761 | ambiguous | 0.4845 | ambiguous | -0.538 | Destabilizing | 0.359 | N | 0.54 | neutral | None | None | None | None | N |
K/T | 0.2068 | likely_benign | 0.2051 | benign | -0.315 | Destabilizing | 0.747 | D | 0.431 | neutral | N | 0.483784592 | None | None | N |
K/V | 0.2819 | likely_benign | 0.2681 | benign | 0.34 | Stabilizing | 0.797 | D | 0.652 | prob.neutral | None | None | None | None | N |
K/W | 0.883 | likely_pathogenic | 0.8761 | pathogenic | -0.062 | Destabilizing | 0.989 | D | 0.845 | deleterious | None | None | None | None | N |
K/Y | 0.7433 | likely_pathogenic | 0.7369 | pathogenic | 0.258 | Stabilizing | 0.888 | D | 0.813 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.