Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33499 | 100720;100721;100722 | chr2:178536252;178536251;178536250 | chr2:179400979;179400978;179400977 |
N2AB | 31858 | 95797;95798;95799 | chr2:178536252;178536251;178536250 | chr2:179400979;179400978;179400977 |
N2A | 30931 | 93016;93017;93018 | chr2:178536252;178536251;178536250 | chr2:179400979;179400978;179400977 |
N2B | 24434 | 73525;73526;73527 | chr2:178536252;178536251;178536250 | chr2:179400979;179400978;179400977 |
Novex-1 | 24559 | 73900;73901;73902 | chr2:178536252;178536251;178536250 | chr2:179400979;179400978;179400977 |
Novex-2 | 24626 | 74101;74102;74103 | chr2:178536252;178536251;178536250 | chr2:179400979;179400978;179400977 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs1242533868 | 0.323 | 0.998 | N | 0.689 | 0.319 | 0.362361684037 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 1.67654E-04 | None | 0 | None | 0 | 0 | 0 |
K/N | rs1242533868 | 0.323 | 0.998 | N | 0.689 | 0.319 | 0.362361684037 | gnomAD-4.0.0 | 3.18389E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.5497E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6515 | likely_pathogenic | 0.8052 | pathogenic | -0.304 | Destabilizing | 0.995 | D | 0.6 | neutral | None | None | None | None | I |
K/C | 0.8864 | likely_pathogenic | 0.9206 | pathogenic | -0.206 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
K/D | 0.9062 | likely_pathogenic | 0.9581 | pathogenic | -0.161 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | I |
K/E | 0.4687 | ambiguous | 0.6884 | pathogenic | -0.091 | Destabilizing | 0.958 | D | 0.557 | neutral | N | 0.473808958 | None | None | I |
K/F | 0.9461 | likely_pathogenic | 0.9698 | pathogenic | -0.093 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | I |
K/G | 0.8026 | likely_pathogenic | 0.8871 | pathogenic | -0.623 | Destabilizing | 0.999 | D | 0.597 | neutral | None | None | None | None | I |
K/H | 0.5876 | likely_pathogenic | 0.6752 | pathogenic | -0.994 | Destabilizing | 1.0 | D | 0.688 | prob.neutral | None | None | None | None | I |
K/I | 0.5558 | ambiguous | 0.727 | pathogenic | 0.5 | Stabilizing | 0.98 | D | 0.717 | prob.delet. | N | 0.443061976 | None | None | I |
K/L | 0.6186 | likely_pathogenic | 0.752 | pathogenic | 0.5 | Stabilizing | 0.954 | D | 0.597 | neutral | None | None | None | None | I |
K/M | 0.521 | ambiguous | 0.6801 | pathogenic | 0.306 | Stabilizing | 0.999 | D | 0.68 | prob.neutral | None | None | None | None | I |
K/N | 0.8114 | likely_pathogenic | 0.9069 | pathogenic | -0.168 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | N | 0.517061089 | None | None | I |
K/P | 0.942 | likely_pathogenic | 0.9591 | pathogenic | 0.262 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
K/Q | 0.2379 | likely_benign | 0.3409 | ambiguous | -0.25 | Destabilizing | 0.97 | D | 0.687 | prob.neutral | N | 0.502977071 | None | None | I |
K/R | 0.0977 | likely_benign | 0.1017 | benign | -0.505 | Destabilizing | 0.042 | N | 0.198 | neutral | N | 0.460975733 | None | None | I |
K/S | 0.7374 | likely_pathogenic | 0.864 | pathogenic | -0.661 | Destabilizing | 0.995 | D | 0.611 | neutral | None | None | None | None | I |
K/T | 0.3804 | ambiguous | 0.5679 | pathogenic | -0.412 | Destabilizing | 0.994 | D | 0.67 | neutral | N | 0.435634572 | None | None | I |
K/V | 0.5306 | ambiguous | 0.6872 | pathogenic | 0.262 | Stabilizing | 0.965 | D | 0.682 | prob.neutral | None | None | None | None | I |
K/W | 0.9239 | likely_pathogenic | 0.9464 | pathogenic | -0.052 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
K/Y | 0.899 | likely_pathogenic | 0.9327 | pathogenic | 0.22 | Stabilizing | 0.99 | D | 0.701 | prob.neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.