Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33502 | 100729;100730;100731 | chr2:178536243;178536242;178536241 | chr2:179400970;179400969;179400968 |
N2AB | 31861 | 95806;95807;95808 | chr2:178536243;178536242;178536241 | chr2:179400970;179400969;179400968 |
N2A | 30934 | 93025;93026;93027 | chr2:178536243;178536242;178536241 | chr2:179400970;179400969;179400968 |
N2B | 24437 | 73534;73535;73536 | chr2:178536243;178536242;178536241 | chr2:179400970;179400969;179400968 |
Novex-1 | 24562 | 73909;73910;73911 | chr2:178536243;178536242;178536241 | chr2:179400970;179400969;179400968 |
Novex-2 | 24629 | 74110;74111;74112 | chr2:178536243;178536242;178536241 | chr2:179400970;179400969;179400968 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/Q | rs1464765995 | None | 0.998 | D | 0.733 | 0.76 | 0.817378622091 | gnomAD-4.0.0 | 1.59217E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77546E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9596 | likely_pathogenic | 0.9168 | pathogenic | -2.019 | Highly Destabilizing | 0.99 | D | 0.563 | neutral | None | None | None | None | N |
L/C | 0.9689 | likely_pathogenic | 0.941 | pathogenic | -1.403 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
L/D | 0.9989 | likely_pathogenic | 0.9981 | pathogenic | -1.328 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
L/E | 0.9944 | likely_pathogenic | 0.9914 | pathogenic | -1.174 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
L/F | 0.8386 | likely_pathogenic | 0.8015 | pathogenic | -1.153 | Destabilizing | 0.993 | D | 0.64 | neutral | None | None | None | None | N |
L/G | 0.9914 | likely_pathogenic | 0.9841 | pathogenic | -2.504 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
L/H | 0.9935 | likely_pathogenic | 0.9902 | pathogenic | -1.797 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
L/I | 0.3073 | likely_benign | 0.2302 | benign | -0.675 | Destabilizing | 0.009 | N | 0.274 | neutral | None | None | None | None | N |
L/K | 0.9914 | likely_pathogenic | 0.9877 | pathogenic | -1.263 | Destabilizing | 0.953 | D | 0.712 | prob.delet. | None | None | None | None | N |
L/M | 0.4206 | ambiguous | 0.3911 | ambiguous | -0.698 | Destabilizing | 0.968 | D | 0.638 | neutral | D | 0.553574748 | None | None | N |
L/N | 0.9925 | likely_pathogenic | 0.9881 | pathogenic | -1.334 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/P | 0.9313 | likely_pathogenic | 0.7337 | pathogenic | -1.097 | Destabilizing | 0.999 | D | 0.79 | deleterious | N | 0.480484214 | None | None | N |
L/Q | 0.9842 | likely_pathogenic | 0.9765 | pathogenic | -1.28 | Destabilizing | 0.998 | D | 0.733 | prob.delet. | D | 0.572783694 | None | None | N |
L/R | 0.9892 | likely_pathogenic | 0.9842 | pathogenic | -0.994 | Destabilizing | 0.998 | D | 0.722 | prob.delet. | D | 0.567040298 | None | None | N |
L/S | 0.9936 | likely_pathogenic | 0.9879 | pathogenic | -2.149 | Highly Destabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
L/T | 0.9661 | likely_pathogenic | 0.9393 | pathogenic | -1.846 | Destabilizing | 0.99 | D | 0.695 | prob.neutral | None | None | None | None | N |
L/V | 0.4534 | ambiguous | 0.3331 | benign | -1.097 | Destabilizing | 0.036 | N | 0.368 | neutral | D | 0.550415524 | None | None | N |
L/W | 0.9778 | likely_pathogenic | 0.9731 | pathogenic | -1.347 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | None | None | None | None | N |
L/Y | 0.987 | likely_pathogenic | 0.9838 | pathogenic | -1.064 | Destabilizing | 0.99 | D | 0.693 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.