Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33503 | 100732;100733;100734 | chr2:178536240;178536239;178536238 | chr2:179400967;179400966;179400965 |
N2AB | 31862 | 95809;95810;95811 | chr2:178536240;178536239;178536238 | chr2:179400967;179400966;179400965 |
N2A | 30935 | 93028;93029;93030 | chr2:178536240;178536239;178536238 | chr2:179400967;179400966;179400965 |
N2B | 24438 | 73537;73538;73539 | chr2:178536240;178536239;178536238 | chr2:179400967;179400966;179400965 |
Novex-1 | 24563 | 73912;73913;73914 | chr2:178536240;178536239;178536238 | chr2:179400967;179400966;179400965 |
Novex-2 | 24630 | 74113;74114;74115 | chr2:178536240;178536239;178536238 | chr2:179400967;179400966;179400965 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/I | rs1333857764 | None | 0.998 | D | 0.73 | 0.477 | 0.473065174198 | gnomAD-4.0.0 | 1.36878E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79919E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9722 | likely_pathogenic | 0.9593 | pathogenic | 0.101 | Stabilizing | 0.983 | D | 0.586 | neutral | None | None | None | None | N |
R/C | 0.8258 | likely_pathogenic | 0.7593 | pathogenic | -0.092 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | N |
R/D | 0.9891 | likely_pathogenic | 0.9854 | pathogenic | -0.235 | Destabilizing | 0.968 | D | 0.562 | neutral | None | None | None | None | N |
R/E | 0.948 | likely_pathogenic | 0.9276 | pathogenic | -0.184 | Destabilizing | 0.193 | N | 0.287 | neutral | None | None | None | None | N |
R/F | 0.9847 | likely_pathogenic | 0.9736 | pathogenic | -0.151 | Destabilizing | 0.998 | D | 0.718 | prob.delet. | None | None | None | None | N |
R/G | 0.9217 | likely_pathogenic | 0.9019 | pathogenic | -0.064 | Destabilizing | 0.989 | D | 0.561 | neutral | N | 0.485999179 | None | None | N |
R/H | 0.5907 | likely_pathogenic | 0.5318 | ambiguous | -0.593 | Destabilizing | 0.998 | D | 0.646 | neutral | None | None | None | None | N |
R/I | 0.9554 | likely_pathogenic | 0.9298 | pathogenic | 0.496 | Stabilizing | 0.998 | D | 0.73 | prob.delet. | D | 0.533502261 | None | None | N |
R/K | 0.4396 | ambiguous | 0.3812 | ambiguous | -0.03 | Destabilizing | 0.689 | D | 0.509 | neutral | N | 0.464060819 | None | None | N |
R/L | 0.9106 | likely_pathogenic | 0.8858 | pathogenic | 0.496 | Stabilizing | 0.994 | D | 0.575 | neutral | None | None | None | None | N |
R/M | 0.9653 | likely_pathogenic | 0.9479 | pathogenic | 0.026 | Stabilizing | 1.0 | D | 0.675 | prob.neutral | None | None | None | None | N |
R/N | 0.9793 | likely_pathogenic | 0.9712 | pathogenic | 0.126 | Stabilizing | 0.998 | D | 0.61 | neutral | None | None | None | None | N |
R/P | 0.9797 | likely_pathogenic | 0.9727 | pathogenic | 0.383 | Stabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
R/Q | 0.5494 | ambiguous | 0.4785 | ambiguous | 0.069 | Stabilizing | 0.978 | D | 0.613 | neutral | None | None | None | None | N |
R/S | 0.9775 | likely_pathogenic | 0.969 | pathogenic | -0.078 | Destabilizing | 0.978 | D | 0.624 | neutral | N | 0.482841368 | None | None | N |
R/T | 0.9651 | likely_pathogenic | 0.9448 | pathogenic | 0.088 | Stabilizing | 0.997 | D | 0.631 | neutral | N | 0.494021153 | None | None | N |
R/V | 0.9599 | likely_pathogenic | 0.9392 | pathogenic | 0.383 | Stabilizing | 0.992 | D | 0.712 | prob.delet. | None | None | None | None | N |
R/W | 0.8606 | likely_pathogenic | 0.7928 | pathogenic | -0.297 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
R/Y | 0.9597 | likely_pathogenic | 0.9353 | pathogenic | 0.111 | Stabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.