Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33519 | 100780;100781;100782 | chr2:178536192;178536191;178536190 | chr2:179400919;179400918;179400917 |
N2AB | 31878 | 95857;95858;95859 | chr2:178536192;178536191;178536190 | chr2:179400919;179400918;179400917 |
N2A | 30951 | 93076;93077;93078 | chr2:178536192;178536191;178536190 | chr2:179400919;179400918;179400917 |
N2B | 24454 | 73585;73586;73587 | chr2:178536192;178536191;178536190 | chr2:179400919;179400918;179400917 |
Novex-1 | 24579 | 73960;73961;73962 | chr2:178536192;178536191;178536190 | chr2:179400919;179400918;179400917 |
Novex-2 | 24646 | 74161;74162;74163 | chr2:178536192;178536191;178536190 | chr2:179400919;179400918;179400917 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.381 | D | 0.673 | 0.378 | 0.485493271093 | gnomAD-4.0.0 | 1.36873E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79922E-06 | 0 | 0 |
V/M | None | None | 0.994 | D | 0.727 | 0.548 | 0.688093782497 | gnomAD-4.0.0 | 6.84367E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99609E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.9526 | likely_pathogenic | 0.9304 | pathogenic | -2.201 | Highly Destabilizing | 0.906 | D | 0.679 | prob.neutral | N | 0.466882985 | None | None | N |
V/C | 0.9857 | likely_pathogenic | 0.9794 | pathogenic | -1.685 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | N |
V/D | 0.9989 | likely_pathogenic | 0.9984 | pathogenic | -3.073 | Highly Destabilizing | 0.991 | D | 0.815 | deleterious | None | None | None | None | N |
V/E | 0.9959 | likely_pathogenic | 0.9943 | pathogenic | -2.887 | Highly Destabilizing | 0.052 | N | 0.558 | neutral | D | 0.601784633 | None | None | N |
V/F | 0.8856 | likely_pathogenic | 0.8349 | pathogenic | -1.177 | Destabilizing | 0.997 | D | 0.779 | deleterious | None | None | None | None | N |
V/G | 0.9764 | likely_pathogenic | 0.9679 | pathogenic | -2.68 | Highly Destabilizing | 0.996 | D | 0.812 | deleterious | D | 0.564406124 | None | None | N |
V/H | 0.999 | likely_pathogenic | 0.9986 | pathogenic | -2.446 | Highly Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
V/I | 0.1067 | likely_benign | 0.0898 | benign | -0.85 | Destabilizing | 0.05 | N | 0.299 | neutral | None | None | None | None | N |
V/K | 0.9978 | likely_pathogenic | 0.9967 | pathogenic | -1.811 | Destabilizing | 0.975 | D | 0.797 | deleterious | None | None | None | None | N |
V/L | 0.7915 | likely_pathogenic | 0.7058 | pathogenic | -0.85 | Destabilizing | 0.381 | N | 0.673 | neutral | D | 0.535426621 | None | None | N |
V/M | 0.7963 | likely_pathogenic | 0.7281 | pathogenic | -0.858 | Destabilizing | 0.994 | D | 0.727 | prob.delet. | D | 0.585129499 | None | None | N |
V/N | 0.9962 | likely_pathogenic | 0.9941 | pathogenic | -2.081 | Highly Destabilizing | 0.92 | D | 0.826 | deleterious | None | None | None | None | N |
V/P | 0.9981 | likely_pathogenic | 0.9968 | pathogenic | -1.278 | Destabilizing | 0.959 | D | 0.803 | deleterious | None | None | None | None | N |
V/Q | 0.9964 | likely_pathogenic | 0.9949 | pathogenic | -1.95 | Destabilizing | 0.965 | D | 0.803 | deleterious | None | None | None | None | N |
V/R | 0.9962 | likely_pathogenic | 0.9947 | pathogenic | -1.586 | Destabilizing | 0.994 | D | 0.827 | deleterious | None | None | None | None | N |
V/S | 0.9885 | likely_pathogenic | 0.9838 | pathogenic | -2.587 | Highly Destabilizing | 0.978 | D | 0.796 | deleterious | None | None | None | None | N |
V/T | 0.9605 | likely_pathogenic | 0.95 | pathogenic | -2.29 | Highly Destabilizing | 0.911 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/W | 0.9987 | likely_pathogenic | 0.998 | pathogenic | -1.781 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
V/Y | 0.9914 | likely_pathogenic | 0.9876 | pathogenic | -1.499 | Destabilizing | 0.999 | D | 0.775 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.