Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33522 | 100789;100790;100791 | chr2:178536183;178536182;178536181 | chr2:179400910;179400909;179400908 |
N2AB | 31881 | 95866;95867;95868 | chr2:178536183;178536182;178536181 | chr2:179400910;179400909;179400908 |
N2A | 30954 | 93085;93086;93087 | chr2:178536183;178536182;178536181 | chr2:179400910;179400909;179400908 |
N2B | 24457 | 73594;73595;73596 | chr2:178536183;178536182;178536181 | chr2:179400910;179400909;179400908 |
Novex-1 | 24582 | 73969;73970;73971 | chr2:178536183;178536182;178536181 | chr2:179400910;179400909;179400908 |
Novex-2 | 24649 | 74170;74171;74172 | chr2:178536183;178536182;178536181 | chr2:179400910;179400909;179400908 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/D | None | None | 0.468 | N | 0.481 | 0.304 | 0.311079019809 | gnomAD-4.0.0 | 1.59207E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85953E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.518 | ambiguous | 0.4985 | ambiguous | 0.39 | Stabilizing | 0.886 | D | 0.519 | neutral | None | None | None | None | I |
H/C | 0.2502 | likely_benign | 0.2608 | benign | 0.478 | Stabilizing | 0.995 | D | 0.525 | neutral | None | None | None | None | I |
H/D | 0.5424 | ambiguous | 0.5834 | pathogenic | -0.297 | Destabilizing | 0.468 | N | 0.481 | neutral | N | 0.432700549 | None | None | I |
H/E | 0.5286 | ambiguous | 0.5364 | ambiguous | -0.302 | Destabilizing | 0.617 | D | 0.359 | neutral | None | None | None | None | I |
H/F | 0.2454 | likely_benign | 0.2138 | benign | 0.801 | Stabilizing | 0.883 | D | 0.495 | neutral | None | None | None | None | I |
H/G | 0.7394 | likely_pathogenic | 0.7322 | pathogenic | 0.2 | Stabilizing | 0.886 | D | 0.542 | neutral | None | None | None | None | I |
H/I | 0.3075 | likely_benign | 0.2998 | benign | 0.849 | Stabilizing | 0.956 | D | 0.523 | neutral | None | None | None | None | I |
H/K | 0.44 | ambiguous | 0.4313 | ambiguous | 0.288 | Stabilizing | 0.607 | D | 0.493 | neutral | None | None | None | None | I |
H/L | 0.1833 | likely_benign | 0.1845 | benign | 0.849 | Stabilizing | 0.699 | D | 0.558 | neutral | N | 0.479705062 | None | None | I |
H/M | 0.5039 | ambiguous | 0.4805 | ambiguous | 0.528 | Stabilizing | 0.996 | D | 0.529 | neutral | None | None | None | None | I |
H/N | 0.1563 | likely_benign | 0.1576 | benign | 0.156 | Stabilizing | 0.023 | N | 0.271 | neutral | N | 0.443378902 | None | None | I |
H/P | 0.8533 | likely_pathogenic | 0.8532 | pathogenic | 0.718 | Stabilizing | 0.974 | D | 0.542 | neutral | N | 0.48742753 | None | None | I |
H/Q | 0.2522 | likely_benign | 0.247 | benign | 0.194 | Stabilizing | 0.179 | N | 0.236 | neutral | N | 0.455846767 | None | None | I |
H/R | 0.2407 | likely_benign | 0.2446 | benign | -0.125 | Destabilizing | 0.699 | D | 0.411 | neutral | N | 0.47585668 | None | None | I |
H/S | 0.3433 | ambiguous | 0.3251 | benign | 0.287 | Stabilizing | 0.886 | D | 0.489 | neutral | None | None | None | None | I |
H/T | 0.3732 | ambiguous | 0.3811 | ambiguous | 0.366 | Stabilizing | 0.699 | D | 0.553 | neutral | None | None | None | None | I |
H/V | 0.3044 | likely_benign | 0.2912 | benign | 0.718 | Stabilizing | 0.867 | D | 0.519 | neutral | None | None | None | None | I |
H/W | 0.4647 | ambiguous | 0.4546 | ambiguous | 0.654 | Stabilizing | 0.999 | D | 0.543 | neutral | None | None | None | None | I |
H/Y | 0.0834 | likely_benign | 0.0797 | benign | 0.924 | Stabilizing | 0.042 | N | 0.271 | neutral | N | 0.455270764 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.