Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3353 | 10282;10283;10284 | chr2:178764234;178764233;178764232 | chr2:179628961;179628960;179628959 |
N2AB | 3353 | 10282;10283;10284 | chr2:178764234;178764233;178764232 | chr2:179628961;179628960;179628959 |
N2A | 3353 | 10282;10283;10284 | chr2:178764234;178764233;178764232 | chr2:179628961;179628960;179628959 |
N2B | 3307 | 10144;10145;10146 | chr2:178764234;178764233;178764232 | chr2:179628961;179628960;179628959 |
Novex-1 | 3307 | 10144;10145;10146 | chr2:178764234;178764233;178764232 | chr2:179628961;179628960;179628959 |
Novex-2 | 3307 | 10144;10145;10146 | chr2:178764234;178764233;178764232 | chr2:179628961;179628960;179628959 |
Novex-3 | 3353 | 10282;10283;10284 | chr2:178764234;178764233;178764232 | chr2:179628961;179628960;179628959 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/N | None | None | 0.576 | N | 0.262 | 0.248 | 0.258779203287 | gnomAD-4.0.0 | 1.5906E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85673E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4218 | ambiguous | 0.372 | ambiguous | -0.249 | Destabilizing | 0.956 | D | 0.489 | neutral | D | 0.552951801 | None | None | N |
D/C | 0.9136 | likely_pathogenic | 0.8591 | pathogenic | 0.121 | Stabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
D/E | 0.3645 | ambiguous | 0.3831 | ambiguous | -0.299 | Destabilizing | 0.978 | D | 0.43 | neutral | D | 0.571772831 | None | None | N |
D/F | 0.9297 | likely_pathogenic | 0.9127 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
D/G | 0.3083 | likely_benign | 0.2663 | benign | -0.453 | Destabilizing | 0.978 | D | 0.497 | neutral | D | 0.625278243 | None | None | N |
D/H | 0.5443 | ambiguous | 0.4573 | ambiguous | -0.186 | Destabilizing | 0.999 | D | 0.645 | neutral | D | 0.588754648 | None | None | N |
D/I | 0.8562 | likely_pathogenic | 0.8235 | pathogenic | 0.24 | Stabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/K | 0.6866 | likely_pathogenic | 0.6925 | pathogenic | 0.304 | Stabilizing | 0.995 | D | 0.612 | neutral | None | None | None | None | N |
D/L | 0.8237 | likely_pathogenic | 0.8079 | pathogenic | 0.24 | Stabilizing | 0.998 | D | 0.684 | prob.neutral | None | None | None | None | N |
D/M | 0.9214 | likely_pathogenic | 0.9071 | pathogenic | 0.422 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/N | 0.1259 | likely_benign | 0.1109 | benign | 0.071 | Stabilizing | 0.576 | D | 0.262 | neutral | N | 0.502596257 | None | None | N |
D/P | 0.665 | likely_pathogenic | 0.6443 | pathogenic | 0.1 | Stabilizing | 0.998 | D | 0.682 | prob.neutral | None | None | None | None | N |
D/Q | 0.6763 | likely_pathogenic | 0.6654 | pathogenic | 0.1 | Stabilizing | 0.998 | D | 0.605 | neutral | None | None | None | None | N |
D/R | 0.7494 | likely_pathogenic | 0.7353 | pathogenic | 0.424 | Stabilizing | 0.998 | D | 0.678 | prob.neutral | None | None | None | None | N |
D/S | 0.2503 | likely_benign | 0.1973 | benign | -0.055 | Destabilizing | 0.84 | D | 0.253 | neutral | None | None | None | None | N |
D/T | 0.6072 | likely_pathogenic | 0.5441 | ambiguous | 0.101 | Stabilizing | 0.967 | D | 0.601 | neutral | None | None | None | None | N |
D/V | 0.6764 | likely_pathogenic | 0.6358 | pathogenic | 0.1 | Stabilizing | 0.997 | D | 0.702 | prob.neutral | D | 0.636831928 | None | None | N |
D/W | 0.981 | likely_pathogenic | 0.9754 | pathogenic | -0.143 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | N |
D/Y | 0.5666 | likely_pathogenic | 0.5266 | ambiguous | -0.015 | Destabilizing | 1.0 | D | 0.686 | prob.neutral | D | 0.65709196 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.