Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33534 | 100825;100826;100827 | chr2:178536147;178536146;178536145 | chr2:179400874;179400873;179400872 |
N2AB | 31893 | 95902;95903;95904 | chr2:178536147;178536146;178536145 | chr2:179400874;179400873;179400872 |
N2A | 30966 | 93121;93122;93123 | chr2:178536147;178536146;178536145 | chr2:179400874;179400873;179400872 |
N2B | 24469 | 73630;73631;73632 | chr2:178536147;178536146;178536145 | chr2:179400874;179400873;179400872 |
Novex-1 | 24594 | 74005;74006;74007 | chr2:178536147;178536146;178536145 | chr2:179400874;179400873;179400872 |
Novex-2 | 24661 | 74206;74207;74208 | chr2:178536147;178536146;178536145 | chr2:179400874;179400873;179400872 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | None | None | 0.998 | N | 0.669 | 0.604 | 0.509878532422 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.7985 | likely_pathogenic | 0.8198 | pathogenic | 0.015 | Stabilizing | 0.998 | D | 0.667 | neutral | None | None | None | None | N |
K/C | 0.912 | likely_pathogenic | 0.9169 | pathogenic | -0.363 | Destabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
K/D | 0.8987 | likely_pathogenic | 0.9117 | pathogenic | -0.037 | Destabilizing | 0.999 | D | 0.688 | prob.neutral | None | None | None | None | N |
K/E | 0.4574 | ambiguous | 0.5038 | ambiguous | -0.014 | Destabilizing | 0.992 | D | 0.648 | neutral | N | 0.475742037 | None | None | N |
K/F | 0.9674 | likely_pathogenic | 0.9685 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.656 | neutral | None | None | None | None | N |
K/G | 0.8663 | likely_pathogenic | 0.8748 | pathogenic | -0.186 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
K/H | 0.5765 | likely_pathogenic | 0.6269 | pathogenic | -0.341 | Destabilizing | 1.0 | D | 0.628 | neutral | None | None | None | None | N |
K/I | 0.7497 | likely_pathogenic | 0.7709 | pathogenic | 0.469 | Stabilizing | 0.977 | D | 0.683 | prob.neutral | N | 0.501872632 | None | None | N |
K/L | 0.7847 | likely_pathogenic | 0.8011 | pathogenic | 0.469 | Stabilizing | 0.982 | D | 0.625 | neutral | None | None | None | None | N |
K/M | 0.6266 | likely_pathogenic | 0.6634 | pathogenic | 0.046 | Stabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
K/N | 0.7319 | likely_pathogenic | 0.7739 | pathogenic | 0.018 | Stabilizing | 0.999 | D | 0.681 | prob.neutral | N | 0.477918337 | None | None | N |
K/P | 0.9915 | likely_pathogenic | 0.9925 | pathogenic | 0.345 | Stabilizing | 0.999 | D | 0.657 | neutral | None | None | None | None | N |
K/Q | 0.2555 | likely_benign | 0.2985 | benign | -0.078 | Destabilizing | 0.994 | D | 0.663 | neutral | N | 0.457790994 | None | None | N |
K/R | 0.1018 | likely_benign | 0.1142 | benign | -0.102 | Destabilizing | 0.987 | D | 0.57 | neutral | N | 0.481073286 | None | None | N |
K/S | 0.8128 | likely_pathogenic | 0.8375 | pathogenic | -0.404 | Destabilizing | 0.998 | D | 0.651 | neutral | None | None | None | None | N |
K/T | 0.5799 | likely_pathogenic | 0.623 | pathogenic | -0.232 | Destabilizing | 0.998 | D | 0.669 | neutral | N | 0.498754969 | None | None | N |
K/V | 0.7111 | likely_pathogenic | 0.7398 | pathogenic | 0.345 | Stabilizing | 0.987 | D | 0.665 | neutral | None | None | None | None | N |
K/W | 0.9616 | likely_pathogenic | 0.9677 | pathogenic | -0.222 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/Y | 0.918 | likely_pathogenic | 0.9288 | pathogenic | 0.128 | Stabilizing | 0.997 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.