Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33536 | 100831;100832;100833 | chr2:178536141;178536140;178536139 | chr2:179400868;179400867;179400866 |
N2AB | 31895 | 95908;95909;95910 | chr2:178536141;178536140;178536139 | chr2:179400868;179400867;179400866 |
N2A | 30968 | 93127;93128;93129 | chr2:178536141;178536140;178536139 | chr2:179400868;179400867;179400866 |
N2B | 24471 | 73636;73637;73638 | chr2:178536141;178536140;178536139 | chr2:179400868;179400867;179400866 |
Novex-1 | 24596 | 74011;74012;74013 | chr2:178536141;178536140;178536139 | chr2:179400868;179400867;179400866 |
Novex-2 | 24663 | 74212;74213;74214 | chr2:178536141;178536140;178536139 | chr2:179400868;179400867;179400866 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 1.0 | N | 0.687 | 0.698 | 0.901312021487 | gnomAD-4.0.0 | 1.36854E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79902E-06 | 0 | 0 |
I/T | None | None | 0.995 | N | 0.626 | 0.639 | 0.778069038823 | gnomAD-4.0.0 | 6.84268E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99509E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9669 | likely_pathogenic | 0.9467 | pathogenic | -2.019 | Highly Destabilizing | 0.999 | D | 0.583 | neutral | None | None | None | None | N |
I/C | 0.9683 | likely_pathogenic | 0.9504 | pathogenic | -1.128 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
I/D | 0.9979 | likely_pathogenic | 0.9966 | pathogenic | -2.693 | Highly Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | N |
I/E | 0.9933 | likely_pathogenic | 0.989 | pathogenic | -2.417 | Highly Destabilizing | 1.0 | D | 0.776 | deleterious | None | None | None | None | N |
I/F | 0.7571 | likely_pathogenic | 0.6746 | pathogenic | -1.308 | Destabilizing | 0.999 | D | 0.597 | neutral | N | 0.505259204 | None | None | N |
I/G | 0.9939 | likely_pathogenic | 0.9897 | pathogenic | -2.541 | Highly Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
I/H | 0.9933 | likely_pathogenic | 0.9889 | pathogenic | -2.2 | Highly Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
I/K | 0.9871 | likely_pathogenic | 0.9813 | pathogenic | -1.482 | Destabilizing | 0.998 | D | 0.775 | deleterious | None | None | None | None | N |
I/L | 0.2197 | likely_benign | 0.1824 | benign | -0.48 | Destabilizing | 0.026 | N | 0.222 | neutral | N | 0.483145225 | None | None | N |
I/M | 0.3094 | likely_benign | 0.2763 | benign | -0.465 | Destabilizing | 0.997 | D | 0.607 | neutral | N | 0.490686895 | None | None | N |
I/N | 0.9764 | likely_pathogenic | 0.9644 | pathogenic | -2.065 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | N | 0.517794052 | None | None | N |
I/P | 0.996 | likely_pathogenic | 0.9939 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
I/Q | 0.9878 | likely_pathogenic | 0.9802 | pathogenic | -1.797 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
I/R | 0.9831 | likely_pathogenic | 0.9756 | pathogenic | -1.557 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
I/S | 0.9867 | likely_pathogenic | 0.9799 | pathogenic | -2.596 | Highly Destabilizing | 1.0 | D | 0.687 | prob.neutral | N | 0.511691212 | None | None | N |
I/T | 0.9688 | likely_pathogenic | 0.9525 | pathogenic | -2.167 | Highly Destabilizing | 0.995 | D | 0.626 | neutral | N | 0.511536174 | None | None | N |
I/V | 0.1671 | likely_benign | 0.15 | benign | -0.98 | Destabilizing | 0.262 | N | 0.216 | neutral | N | 0.483958875 | None | None | N |
I/W | 0.99 | likely_pathogenic | 0.9852 | pathogenic | -1.701 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
I/Y | 0.9708 | likely_pathogenic | 0.9525 | pathogenic | -1.34 | Destabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.