Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3354 | 10285;10286;10287 | chr2:178764231;178764230;178764229 | chr2:179628958;179628957;179628956 |
N2AB | 3354 | 10285;10286;10287 | chr2:178764231;178764230;178764229 | chr2:179628958;179628957;179628956 |
N2A | 3354 | 10285;10286;10287 | chr2:178764231;178764230;178764229 | chr2:179628958;179628957;179628956 |
N2B | 3308 | 10147;10148;10149 | chr2:178764231;178764230;178764229 | chr2:179628958;179628957;179628956 |
Novex-1 | 3308 | 10147;10148;10149 | chr2:178764231;178764230;178764229 | chr2:179628958;179628957;179628956 |
Novex-2 | 3308 | 10147;10148;10149 | chr2:178764231;178764230;178764229 | chr2:179628958;179628957;179628956 |
Novex-3 | 3354 | 10285;10286;10287 | chr2:178764231;178764230;178764229 | chr2:179628958;179628957;179628956 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1487871864 | None | None | N | 0.209 | 0.045 | 0.32980341726 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
T/I | rs1487871864 | None | None | N | 0.209 | 0.045 | 0.32980341726 | gnomAD-4.0.0 | 6.56996E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.46985E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0749 | likely_benign | 0.0681 | benign | -1.072 | Destabilizing | None | N | 0.081 | neutral | N | 0.495301992 | None | None | N |
T/C | 0.4535 | ambiguous | 0.344 | ambiguous | -0.624 | Destabilizing | 0.824 | D | 0.321 | neutral | None | None | None | None | N |
T/D | 0.5267 | ambiguous | 0.4662 | ambiguous | -0.271 | Destabilizing | 0.38 | N | 0.338 | neutral | None | None | None | None | N |
T/E | 0.3471 | ambiguous | 0.3294 | benign | -0.24 | Destabilizing | 0.149 | N | 0.323 | neutral | None | None | None | None | N |
T/F | 0.3073 | likely_benign | 0.2481 | benign | -1.053 | Destabilizing | 0.38 | N | 0.383 | neutral | None | None | None | None | N |
T/G | 0.3767 | ambiguous | 0.3111 | benign | -1.361 | Destabilizing | 0.081 | N | 0.381 | neutral | None | None | None | None | N |
T/H | 0.3244 | likely_benign | 0.2919 | benign | -1.587 | Destabilizing | 0.935 | D | 0.368 | neutral | None | None | None | None | N |
T/I | 0.1239 | likely_benign | 0.1082 | benign | -0.378 | Destabilizing | None | N | 0.209 | neutral | N | 0.485115069 | None | None | N |
T/K | 0.2283 | likely_benign | 0.2235 | benign | -0.736 | Destabilizing | 0.149 | N | 0.331 | neutral | None | None | None | None | N |
T/L | 0.1227 | likely_benign | 0.1033 | benign | -0.378 | Destabilizing | 0.012 | N | 0.379 | neutral | None | None | None | None | N |
T/M | 0.0909 | likely_benign | 0.0861 | benign | -0.077 | Destabilizing | 0.38 | N | 0.335 | neutral | None | None | None | None | N |
T/N | 0.212 | likely_benign | 0.1883 | benign | -0.738 | Destabilizing | 0.484 | N | 0.332 | neutral | D | 0.531368121 | None | None | N |
T/P | 0.5453 | ambiguous | 0.4855 | ambiguous | -0.578 | Destabilizing | 0.317 | N | 0.334 | neutral | D | 0.58353678 | None | None | N |
T/Q | 0.2727 | likely_benign | 0.2609 | benign | -0.872 | Destabilizing | 0.555 | D | 0.341 | neutral | None | None | None | None | N |
T/R | 0.1666 | likely_benign | 0.1576 | benign | -0.562 | Destabilizing | 0.38 | N | 0.343 | neutral | None | None | None | None | N |
T/S | 0.1541 | likely_benign | 0.135 | benign | -1.083 | Destabilizing | 0.027 | N | 0.351 | neutral | D | 0.549246756 | None | None | N |
T/V | 0.1075 | likely_benign | 0.0928 | benign | -0.578 | Destabilizing | 0.012 | N | 0.322 | neutral | None | None | None | None | N |
T/W | 0.7272 | likely_pathogenic | 0.6357 | pathogenic | -0.946 | Destabilizing | 0.935 | D | 0.452 | neutral | None | None | None | None | N |
T/Y | 0.3817 | ambiguous | 0.3384 | benign | -0.721 | Destabilizing | 0.555 | D | 0.38 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.