Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33541 | 100846;100847;100848 | chr2:178536126;178536125;178536124 | chr2:179400853;179400852;179400851 |
N2AB | 31900 | 95923;95924;95925 | chr2:178536126;178536125;178536124 | chr2:179400853;179400852;179400851 |
N2A | 30973 | 93142;93143;93144 | chr2:178536126;178536125;178536124 | chr2:179400853;179400852;179400851 |
N2B | 24476 | 73651;73652;73653 | chr2:178536126;178536125;178536124 | chr2:179400853;179400852;179400851 |
Novex-1 | 24601 | 74026;74027;74028 | chr2:178536126;178536125;178536124 | chr2:179400853;179400852;179400851 |
Novex-2 | 24668 | 74227;74228;74229 | chr2:178536126;178536125;178536124 | chr2:179400853;179400852;179400851 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | rs1283891499 | -0.221 | 0.009 | N | 0.128 | 0.245 | 0.68565156927 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/S | rs1283891499 | -0.221 | 0.009 | N | 0.128 | 0.245 | 0.68565156927 | gnomAD-4.0.0 | 1.59168E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85884E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1062 | likely_benign | 0.1295 | benign | -0.417 | Destabilizing | 0.059 | N | 0.187 | neutral | None | None | None | None | I |
L/C | 0.3984 | ambiguous | 0.4379 | ambiguous | -0.678 | Destabilizing | 0.983 | D | 0.181 | neutral | None | None | None | None | I |
L/D | 0.3285 | likely_benign | 0.3417 | ambiguous | -0.126 | Destabilizing | 0.126 | N | 0.227 | neutral | None | None | None | None | I |
L/E | 0.1546 | likely_benign | 0.1573 | benign | -0.226 | Destabilizing | None | N | 0.13 | neutral | None | None | None | None | I |
L/F | 0.1324 | likely_benign | 0.1509 | benign | -0.549 | Destabilizing | 0.82 | D | 0.167 | neutral | N | 0.465632192 | None | None | I |
L/G | 0.2445 | likely_benign | 0.2889 | benign | -0.534 | Destabilizing | 0.224 | N | 0.19 | neutral | None | None | None | None | I |
L/H | 0.1392 | likely_benign | 0.159 | benign | 0.133 | Stabilizing | 0.674 | D | 0.137 | neutral | None | None | None | None | I |
L/I | 0.0759 | likely_benign | 0.0795 | benign | -0.24 | Destabilizing | 0.015 | N | 0.181 | neutral | N | 0.473174239 | None | None | I |
L/K | 0.13 | likely_benign | 0.1249 | benign | -0.246 | Destabilizing | 0.004 | N | 0.198 | neutral | None | None | None | None | I |
L/M | 0.0851 | likely_benign | 0.0982 | benign | -0.427 | Destabilizing | 0.644 | D | 0.195 | neutral | None | None | None | None | I |
L/N | 0.1347 | likely_benign | 0.1435 | benign | -0.094 | Destabilizing | 0.412 | N | 0.221 | neutral | None | None | None | None | I |
L/P | 0.1581 | likely_benign | 0.1992 | benign | -0.268 | Destabilizing | 0.587 | D | 0.256 | neutral | None | None | None | None | I |
L/Q | 0.0696 | likely_benign | 0.0775 | benign | -0.298 | Destabilizing | 0.127 | N | 0.219 | neutral | None | None | None | None | I |
L/R | 0.1496 | likely_benign | 0.1501 | benign | 0.259 | Stabilizing | 0.218 | N | 0.226 | neutral | None | None | None | None | I |
L/S | 0.094 | likely_benign | 0.12 | benign | -0.503 | Destabilizing | 0.009 | N | 0.128 | neutral | N | 0.37146845 | None | None | I |
L/T | 0.0942 | likely_benign | 0.1112 | benign | -0.498 | Destabilizing | None | N | 0.106 | neutral | None | None | None | None | I |
L/V | 0.0722 | likely_benign | 0.0825 | benign | -0.268 | Destabilizing | 0.008 | N | 0.213 | neutral | N | 0.45683935 | None | None | I |
L/W | 0.2522 | likely_benign | 0.2525 | benign | -0.57 | Destabilizing | 0.988 | D | 0.159 | neutral | None | None | None | None | I |
L/Y | 0.2983 | likely_benign | 0.2908 | benign | -0.318 | Destabilizing | 0.414 | N | 0.207 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.