Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33547 | 100864;100865;100866 | chr2:178536108;178536107;178536106 | chr2:179400835;179400834;179400833 |
N2AB | 31906 | 95941;95942;95943 | chr2:178536108;178536107;178536106 | chr2:179400835;179400834;179400833 |
N2A | 30979 | 93160;93161;93162 | chr2:178536108;178536107;178536106 | chr2:179400835;179400834;179400833 |
N2B | 24482 | 73669;73670;73671 | chr2:178536108;178536107;178536106 | chr2:179400835;179400834;179400833 |
Novex-1 | 24607 | 74044;74045;74046 | chr2:178536108;178536107;178536106 | chr2:179400835;179400834;179400833 |
Novex-2 | 24674 | 74245;74246;74247 | chr2:178536108;178536107;178536106 | chr2:179400835;179400834;179400833 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs1365402838 | None | 0.997 | N | 0.773 | 0.465 | 0.493156425868 | gnomAD-4.0.0 | 5.4767E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.1995E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6228 | likely_pathogenic | 0.4769 | ambiguous | -0.721 | Destabilizing | 0.995 | D | 0.746 | deleterious | N | 0.513278918 | None | None | N |
E/C | 0.9901 | likely_pathogenic | 0.9786 | pathogenic | -0.417 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
E/D | 0.4844 | ambiguous | 0.3985 | ambiguous | -0.654 | Destabilizing | 0.965 | D | 0.635 | neutral | N | 0.48297744 | None | None | N |
E/F | 0.9917 | likely_pathogenic | 0.9812 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.746 | deleterious | None | None | None | None | N |
E/G | 0.7771 | likely_pathogenic | 0.6352 | pathogenic | -1.02 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | D | 0.535310415 | None | None | N |
E/H | 0.9579 | likely_pathogenic | 0.9068 | pathogenic | -0.085 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/I | 0.9175 | likely_pathogenic | 0.846 | pathogenic | 0.074 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
E/K | 0.8638 | likely_pathogenic | 0.7196 | pathogenic | -0.251 | Destabilizing | 0.997 | D | 0.773 | deleterious | N | 0.519378171 | None | None | N |
E/L | 0.9611 | likely_pathogenic | 0.9189 | pathogenic | 0.074 | Stabilizing | 0.999 | D | 0.756 | deleterious | None | None | None | None | N |
E/M | 0.942 | likely_pathogenic | 0.8934 | pathogenic | 0.252 | Stabilizing | 0.998 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/N | 0.7994 | likely_pathogenic | 0.6934 | pathogenic | -0.731 | Destabilizing | 0.998 | D | 0.734 | prob.delet. | None | None | None | None | N |
E/P | 0.9677 | likely_pathogenic | 0.9148 | pathogenic | -0.171 | Destabilizing | 0.992 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/Q | 0.5795 | likely_pathogenic | 0.4286 | ambiguous | -0.619 | Destabilizing | 0.999 | D | 0.705 | prob.neutral | N | 0.489095336 | None | None | N |
E/R | 0.9266 | likely_pathogenic | 0.8379 | pathogenic | 0.133 | Stabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/S | 0.6924 | likely_pathogenic | 0.5599 | ambiguous | -0.961 | Destabilizing | 0.997 | D | 0.743 | deleterious | None | None | None | None | N |
E/T | 0.7145 | likely_pathogenic | 0.5736 | pathogenic | -0.711 | Destabilizing | 0.999 | D | 0.725 | prob.delet. | None | None | None | None | N |
E/V | 0.7793 | likely_pathogenic | 0.6557 | pathogenic | -0.171 | Destabilizing | 0.998 | D | 0.762 | deleterious | N | 0.516529867 | None | None | N |
E/W | 0.9981 | likely_pathogenic | 0.9948 | pathogenic | 0.126 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
E/Y | 0.9811 | likely_pathogenic | 0.9565 | pathogenic | 0.095 | Stabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.