Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33553 | 100882;100883;100884 | chr2:178536090;178536089;178536088 | chr2:179400817;179400816;179400815 |
N2AB | 31912 | 95959;95960;95961 | chr2:178536090;178536089;178536088 | chr2:179400817;179400816;179400815 |
N2A | 30985 | 93178;93179;93180 | chr2:178536090;178536089;178536088 | chr2:179400817;179400816;179400815 |
N2B | 24488 | 73687;73688;73689 | chr2:178536090;178536089;178536088 | chr2:179400817;179400816;179400815 |
Novex-1 | 24613 | 74062;74063;74064 | chr2:178536090;178536089;178536088 | chr2:179400817;179400816;179400815 |
Novex-2 | 24680 | 74263;74264;74265 | chr2:178536090;178536089;178536088 | chr2:179400817;179400816;179400815 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/Q | rs746903660 | -1.683 | 0.951 | N | 0.678 | 0.341 | 0.380564188046 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
H/Q | rs746903660 | -1.683 | 0.951 | N | 0.678 | 0.341 | 0.380564188046 | gnomAD-4.0.0 | 6.16959E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.11027E-06 | 0 | 0 |
H/Y | rs1575305295 | None | 0.002 | N | 0.375 | 0.222 | 0.227934060464 | gnomAD-4.0.0 | 1.59814E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.87485E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9116 | likely_pathogenic | 0.8364 | pathogenic | -1.971 | Destabilizing | 0.897 | D | 0.659 | neutral | None | None | None | None | N |
H/C | 0.4232 | ambiguous | 0.3687 | ambiguous | -1.112 | Destabilizing | 0.995 | D | 0.718 | prob.delet. | None | None | None | None | N |
H/D | 0.9492 | likely_pathogenic | 0.9223 | pathogenic | -1.979 | Destabilizing | 0.801 | D | 0.655 | neutral | N | 0.493517143 | None | None | N |
H/E | 0.9395 | likely_pathogenic | 0.9035 | pathogenic | -1.77 | Destabilizing | 0.88 | D | 0.656 | neutral | None | None | None | None | N |
H/F | 0.5937 | likely_pathogenic | 0.538 | ambiguous | 0.114 | Stabilizing | 0.709 | D | 0.622 | neutral | None | None | None | None | N |
H/G | 0.9566 | likely_pathogenic | 0.9242 | pathogenic | -2.401 | Highly Destabilizing | 0.947 | D | 0.676 | prob.neutral | None | None | None | None | N |
H/I | 0.8409 | likely_pathogenic | 0.7737 | pathogenic | -0.68 | Destabilizing | 0.924 | D | 0.722 | prob.delet. | None | None | None | None | N |
H/K | 0.8985 | likely_pathogenic | 0.8522 | pathogenic | -1.328 | Destabilizing | 0.777 | D | 0.637 | neutral | None | None | None | None | N |
H/L | 0.533 | ambiguous | 0.4859 | ambiguous | -0.68 | Destabilizing | 0.568 | D | 0.679 | prob.neutral | D | 0.522071759 | None | None | N |
H/M | 0.9018 | likely_pathogenic | 0.8639 | pathogenic | -0.874 | Destabilizing | 0.987 | D | 0.691 | prob.neutral | None | None | None | None | N |
H/N | 0.5556 | ambiguous | 0.5027 | ambiguous | -2.067 | Highly Destabilizing | 0.801 | D | 0.669 | neutral | N | 0.511644122 | None | None | N |
H/P | 0.9842 | likely_pathogenic | 0.9701 | pathogenic | -1.103 | Destabilizing | 0.977 | D | 0.703 | prob.neutral | N | 0.500860977 | None | None | N |
H/Q | 0.6765 | likely_pathogenic | 0.6055 | pathogenic | -1.633 | Destabilizing | 0.951 | D | 0.678 | prob.neutral | N | 0.509238535 | None | None | N |
H/R | 0.6586 | likely_pathogenic | 0.5898 | pathogenic | -1.58 | Destabilizing | 0.842 | D | 0.663 | neutral | N | 0.513356276 | None | None | N |
H/S | 0.7713 | likely_pathogenic | 0.6871 | pathogenic | -2.173 | Highly Destabilizing | 0.897 | D | 0.641 | neutral | None | None | None | None | N |
H/T | 0.8545 | likely_pathogenic | 0.7654 | pathogenic | -1.845 | Destabilizing | 0.842 | D | 0.691 | prob.neutral | None | None | None | None | N |
H/V | 0.7861 | likely_pathogenic | 0.7094 | pathogenic | -1.103 | Destabilizing | 0.784 | D | 0.703 | prob.neutral | None | None | None | None | N |
H/W | 0.7189 | likely_pathogenic | 0.6804 | pathogenic | 0.728 | Stabilizing | 0.989 | D | 0.692 | prob.neutral | None | None | None | None | N |
H/Y | 0.1729 | likely_benign | 0.1618 | benign | 0.448 | Stabilizing | 0.002 | N | 0.375 | neutral | N | 0.468543919 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.