Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33570 | 100933;100934;100935 | chr2:178536039;178536038;178536037 | chr2:179400766;179400765;179400764 |
N2AB | 31929 | 96010;96011;96012 | chr2:178536039;178536038;178536037 | chr2:179400766;179400765;179400764 |
N2A | 31002 | 93229;93230;93231 | chr2:178536039;178536038;178536037 | chr2:179400766;179400765;179400764 |
N2B | 24505 | 73738;73739;73740 | chr2:178536039;178536038;178536037 | chr2:179400766;179400765;179400764 |
Novex-1 | 24630 | 74113;74114;74115 | chr2:178536039;178536038;178536037 | chr2:179400766;179400765;179400764 |
Novex-2 | 24697 | 74314;74315;74316 | chr2:178536039;178536038;178536037 | chr2:179400766;179400765;179400764 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/F | rs1208247404 | None | 0.059 | D | 0.601 | 0.594 | 0.72348304321 | gnomAD-4.0.0 | 1.66186E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.99045E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8884 | likely_pathogenic | 0.8669 | pathogenic | -1.904 | Destabilizing | 0.915 | D | 0.698 | prob.neutral | N | 0.508528625 | None | None | N |
V/C | 0.9375 | likely_pathogenic | 0.9392 | pathogenic | -1.255 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
V/D | 0.9989 | likely_pathogenic | 0.9982 | pathogenic | -2.732 | Highly Destabilizing | 1.0 | D | 0.878 | deleterious | D | 0.558894893 | None | None | N |
V/E | 0.9963 | likely_pathogenic | 0.9945 | pathogenic | -2.452 | Highly Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
V/F | 0.8744 | likely_pathogenic | 0.858 | pathogenic | -1.049 | Destabilizing | 0.059 | N | 0.601 | neutral | D | 0.541462902 | None | None | N |
V/G | 0.9358 | likely_pathogenic | 0.8962 | pathogenic | -2.488 | Highly Destabilizing | 0.996 | D | 0.866 | deleterious | D | 0.558693089 | None | None | N |
V/H | 0.9991 | likely_pathogenic | 0.9987 | pathogenic | -2.41 | Highly Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | N |
V/I | 0.1096 | likely_benign | 0.1435 | benign | -0.237 | Destabilizing | 0.054 | N | 0.356 | neutral | N | 0.487508974 | None | None | N |
V/K | 0.9976 | likely_pathogenic | 0.9967 | pathogenic | -1.426 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/L | 0.6421 | likely_pathogenic | 0.6835 | pathogenic | -0.237 | Destabilizing | 0.257 | N | 0.588 | neutral | D | 0.522274908 | None | None | N |
V/M | 0.7227 | likely_pathogenic | 0.773 | pathogenic | -0.347 | Destabilizing | 0.993 | D | 0.676 | prob.neutral | None | None | None | None | N |
V/N | 0.9952 | likely_pathogenic | 0.9934 | pathogenic | -1.94 | Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
V/P | 0.9985 | likely_pathogenic | 0.9973 | pathogenic | -0.769 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/Q | 0.9955 | likely_pathogenic | 0.9933 | pathogenic | -1.665 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
V/R | 0.9956 | likely_pathogenic | 0.9929 | pathogenic | -1.488 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
V/S | 0.981 | likely_pathogenic | 0.9757 | pathogenic | -2.502 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
V/T | 0.9492 | likely_pathogenic | 0.9394 | pathogenic | -2.07 | Highly Destabilizing | 0.997 | D | 0.737 | prob.delet. | None | None | None | None | N |
V/W | 0.9988 | likely_pathogenic | 0.9984 | pathogenic | -1.675 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | N |
V/Y | 0.992 | likely_pathogenic | 0.9895 | pathogenic | -1.24 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.