Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33574 | 100945;100946;100947 | chr2:178536027;178536026;178536025 | chr2:179400754;179400753;179400752 |
N2AB | 31933 | 96022;96023;96024 | chr2:178536027;178536026;178536025 | chr2:179400754;179400753;179400752 |
N2A | 31006 | 93241;93242;93243 | chr2:178536027;178536026;178536025 | chr2:179400754;179400753;179400752 |
N2B | 24509 | 73750;73751;73752 | chr2:178536027;178536026;178536025 | chr2:179400754;179400753;179400752 |
Novex-1 | 24634 | 74125;74126;74127 | chr2:178536027;178536026;178536025 | chr2:179400754;179400753;179400752 |
Novex-2 | 24701 | 74326;74327;74328 | chr2:178536027;178536026;178536025 | chr2:179400754;179400753;179400752 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1691356141 | None | 0.879 | D | 0.525 | 0.624 | 0.357313475932 | gnomAD-4.0.0 | 3.40251E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.80222E-05 | None | 0 | 0 | 0 | 1.61155E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9952 | likely_pathogenic | 0.9906 | pathogenic | -0.535 | Destabilizing | 0.754 | D | 0.677 | prob.neutral | None | None | None | None | I |
N/C | 0.9342 | likely_pathogenic | 0.9202 | pathogenic | -0.056 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | I |
N/D | 0.9956 | likely_pathogenic | 0.9895 | pathogenic | -1.448 | Destabilizing | 0.935 | D | 0.595 | neutral | D | 0.641824087 | None | None | I |
N/E | 0.9992 | likely_pathogenic | 0.9982 | pathogenic | -1.389 | Destabilizing | 0.984 | D | 0.652 | neutral | None | None | None | None | I |
N/F | 0.9991 | likely_pathogenic | 0.9985 | pathogenic | -0.676 | Destabilizing | 0.999 | D | 0.764 | deleterious | None | None | None | None | I |
N/G | 0.9904 | likely_pathogenic | 0.9805 | pathogenic | -0.804 | Destabilizing | 0.994 | D | 0.54 | neutral | None | None | None | None | I |
N/H | 0.9811 | likely_pathogenic | 0.9632 | pathogenic | -0.767 | Destabilizing | 0.999 | D | 0.697 | prob.neutral | D | 0.643236717 | None | None | I |
N/I | 0.9948 | likely_pathogenic | 0.9892 | pathogenic | 0.119 | Stabilizing | 0.996 | D | 0.764 | deleterious | D | 0.617900409 | None | None | I |
N/K | 0.9994 | likely_pathogenic | 0.9985 | pathogenic | -0.152 | Destabilizing | 0.994 | D | 0.659 | neutral | D | 0.642631304 | None | None | I |
N/L | 0.9876 | likely_pathogenic | 0.9781 | pathogenic | 0.119 | Stabilizing | 0.994 | D | 0.753 | deleterious | None | None | None | None | I |
N/M | 0.9963 | likely_pathogenic | 0.9929 | pathogenic | 0.696 | Stabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
N/P | 0.998 | likely_pathogenic | 0.9961 | pathogenic | -0.071 | Destabilizing | 0.993 | D | 0.738 | prob.delet. | None | None | None | None | I |
N/Q | 0.9986 | likely_pathogenic | 0.9966 | pathogenic | -1.065 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | I |
N/R | 0.998 | likely_pathogenic | 0.9956 | pathogenic | -0.016 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | I |
N/S | 0.7925 | likely_pathogenic | 0.7163 | pathogenic | -0.72 | Destabilizing | 0.879 | D | 0.525 | neutral | D | 0.55766976 | None | None | I |
N/T | 0.9692 | likely_pathogenic | 0.9406 | pathogenic | -0.509 | Destabilizing | 0.065 | N | 0.317 | neutral | D | 0.609956809 | None | None | I |
N/V | 0.9915 | likely_pathogenic | 0.9857 | pathogenic | -0.071 | Destabilizing | 0.928 | D | 0.755 | deleterious | None | None | None | None | I |
N/W | 0.9997 | likely_pathogenic | 0.9994 | pathogenic | -0.558 | Destabilizing | 1.0 | D | 0.727 | prob.delet. | None | None | None | None | I |
N/Y | 0.9927 | likely_pathogenic | 0.9874 | pathogenic | -0.229 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.617900409 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.