Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33578 | 100957;100958;100959 | chr2:178536015;178536014;178536013 | chr2:179400742;179400741;179400740 |
N2AB | 31937 | 96034;96035;96036 | chr2:178536015;178536014;178536013 | chr2:179400742;179400741;179400740 |
N2A | 31010 | 93253;93254;93255 | chr2:178536015;178536014;178536013 | chr2:179400742;179400741;179400740 |
N2B | 24513 | 73762;73763;73764 | chr2:178536015;178536014;178536013 | chr2:179400742;179400741;179400740 |
Novex-1 | 24638 | 74137;74138;74139 | chr2:178536015;178536014;178536013 | chr2:179400742;179400741;179400740 |
Novex-2 | 24705 | 74338;74339;74340 | chr2:178536015;178536014;178536013 | chr2:179400742;179400741;179400740 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs749424660 | -0.53 | 0.999 | N | 0.719 | 0.612 | None | gnomAD-2.1.1 | 9.69E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.06E-05 | 0 |
S/P | rs749424660 | -0.53 | 0.999 | N | 0.719 | 0.612 | None | gnomAD-4.0.0 | 5.25819E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.31544E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1122 | likely_benign | 0.1099 | benign | -0.572 | Destabilizing | 0.936 | D | 0.503 | neutral | N | 0.494386513 | None | None | I |
S/C | 0.2774 | likely_benign | 0.264 | benign | -0.408 | Destabilizing | 1.0 | D | 0.712 | prob.delet. | N | 0.501585447 | None | None | I |
S/D | 0.9393 | likely_pathogenic | 0.9189 | pathogenic | -0.14 | Destabilizing | 0.998 | D | 0.66 | neutral | None | None | None | None | I |
S/E | 0.9306 | likely_pathogenic | 0.9105 | pathogenic | -0.231 | Destabilizing | 0.999 | D | 0.649 | neutral | None | None | None | None | I |
S/F | 0.5988 | likely_pathogenic | 0.5408 | ambiguous | -1.094 | Destabilizing | 1.0 | D | 0.767 | deleterious | D | 0.53769736 | None | None | I |
S/G | 0.3574 | ambiguous | 0.3129 | benign | -0.694 | Destabilizing | 0.999 | D | 0.535 | neutral | None | None | None | None | I |
S/H | 0.8436 | likely_pathogenic | 0.8015 | pathogenic | -1.213 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | I |
S/I | 0.5237 | ambiguous | 0.4723 | ambiguous | -0.373 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | I |
S/K | 0.983 | likely_pathogenic | 0.9766 | pathogenic | -0.651 | Destabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | I |
S/L | 0.3413 | ambiguous | 0.3193 | benign | -0.373 | Destabilizing | 1.0 | D | 0.669 | neutral | None | None | None | None | I |
S/M | 0.4285 | ambiguous | 0.4187 | ambiguous | 0.019 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | I |
S/N | 0.5447 | ambiguous | 0.4873 | ambiguous | -0.381 | Destabilizing | 0.987 | D | 0.646 | neutral | None | None | None | None | I |
S/P | 0.953 | likely_pathogenic | 0.9166 | pathogenic | -0.412 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | N | 0.512688263 | None | None | I |
S/Q | 0.879 | likely_pathogenic | 0.8432 | pathogenic | -0.708 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
S/R | 0.9694 | likely_pathogenic | 0.9557 | pathogenic | -0.379 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | I |
S/T | 0.1964 | likely_benign | 0.1737 | benign | -0.507 | Destabilizing | 0.982 | D | 0.528 | neutral | N | 0.488095259 | None | None | I |
S/V | 0.4386 | ambiguous | 0.4091 | ambiguous | -0.412 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | I |
S/W | 0.8568 | likely_pathogenic | 0.8105 | pathogenic | -1.034 | Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
S/Y | 0.6336 | likely_pathogenic | 0.5915 | pathogenic | -0.792 | Destabilizing | 1.0 | D | 0.762 | deleterious | N | 0.488000642 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.