Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33579 | 100960;100961;100962 | chr2:178536012;178536011;178536010 | chr2:179400739;179400738;179400737 |
N2AB | 31938 | 96037;96038;96039 | chr2:178536012;178536011;178536010 | chr2:179400739;179400738;179400737 |
N2A | 31011 | 93256;93257;93258 | chr2:178536012;178536011;178536010 | chr2:179400739;179400738;179400737 |
N2B | 24514 | 73765;73766;73767 | chr2:178536012;178536011;178536010 | chr2:179400739;179400738;179400737 |
Novex-1 | 24639 | 74140;74141;74142 | chr2:178536012;178536011;178536010 | chr2:179400739;179400738;179400737 |
Novex-2 | 24706 | 74341;74342;74343 | chr2:178536012;178536011;178536010 | chr2:179400739;179400738;179400737 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/M | rs1344390830 | -0.288 | 0.971 | N | 0.563 | 0.352 | 0.585593966701 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 1.14758E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.538 | ambiguous | 0.4224 | ambiguous | -1.064 | Destabilizing | 0.746 | D | 0.529 | neutral | N | 0.442360182 | None | None | I |
V/C | 0.8936 | likely_pathogenic | 0.8766 | pathogenic | -0.921 | Destabilizing | 0.999 | D | 0.615 | neutral | None | None | None | None | I |
V/D | 0.9059 | likely_pathogenic | 0.8441 | pathogenic | -0.04 | Destabilizing | 0.998 | D | 0.77 | deleterious | None | None | None | None | I |
V/E | 0.8144 | likely_pathogenic | 0.7421 | pathogenic | -0.034 | Destabilizing | 0.984 | D | 0.727 | prob.delet. | N | 0.504179432 | None | None | I |
V/F | 0.493 | ambiguous | 0.4451 | ambiguous | -0.744 | Destabilizing | 0.984 | D | 0.623 | neutral | None | None | None | None | I |
V/G | 0.7872 | likely_pathogenic | 0.6965 | pathogenic | -1.365 | Destabilizing | 0.998 | D | 0.749 | deleterious | N | 0.489077052 | None | None | I |
V/H | 0.9318 | likely_pathogenic | 0.9053 | pathogenic | -0.749 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | I |
V/I | 0.0841 | likely_benign | 0.0904 | benign | -0.356 | Destabilizing | 0.002 | N | 0.162 | neutral | None | None | None | None | I |
V/K | 0.8018 | likely_pathogenic | 0.752 | pathogenic | -0.634 | Destabilizing | 0.983 | D | 0.733 | prob.delet. | None | None | None | None | I |
V/L | 0.4494 | ambiguous | 0.421 | ambiguous | -0.356 | Destabilizing | 0.091 | N | 0.407 | neutral | N | 0.504046146 | None | None | I |
V/M | 0.3247 | likely_benign | 0.3227 | benign | -0.458 | Destabilizing | 0.971 | D | 0.563 | neutral | N | 0.493369466 | None | None | I |
V/N | 0.8059 | likely_pathogenic | 0.7514 | pathogenic | -0.496 | Destabilizing | 0.963 | D | 0.782 | deleterious | None | None | None | None | I |
V/P | 0.9942 | likely_pathogenic | 0.9899 | pathogenic | -0.555 | Destabilizing | 0.963 | D | 0.735 | prob.delet. | None | None | None | None | I |
V/Q | 0.7693 | likely_pathogenic | 0.6953 | pathogenic | -0.587 | Destabilizing | 0.992 | D | 0.741 | deleterious | None | None | None | None | I |
V/R | 0.7642 | likely_pathogenic | 0.6988 | pathogenic | -0.27 | Destabilizing | 0.997 | D | 0.779 | deleterious | None | None | None | None | I |
V/S | 0.6832 | likely_pathogenic | 0.5967 | pathogenic | -1.16 | Destabilizing | 0.985 | D | 0.66 | neutral | None | None | None | None | I |
V/T | 0.4942 | ambiguous | 0.438 | ambiguous | -1.023 | Destabilizing | 0.792 | D | 0.544 | neutral | None | None | None | None | I |
V/W | 0.9824 | likely_pathogenic | 0.9752 | pathogenic | -0.854 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
V/Y | 0.9022 | likely_pathogenic | 0.8791 | pathogenic | -0.538 | Destabilizing | 0.997 | D | 0.617 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.