Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33583 | 100972;100973;100974 | chr2:178536000;178535999;178535998 | chr2:179400727;179400726;179400725 |
N2AB | 31942 | 96049;96050;96051 | chr2:178536000;178535999;178535998 | chr2:179400727;179400726;179400725 |
N2A | 31015 | 93268;93269;93270 | chr2:178536000;178535999;178535998 | chr2:179400727;179400726;179400725 |
N2B | 24518 | 73777;73778;73779 | chr2:178536000;178535999;178535998 | chr2:179400727;179400726;179400725 |
Novex-1 | 24643 | 74152;74153;74154 | chr2:178536000;178535999;178535998 | chr2:179400727;179400726;179400725 |
Novex-2 | 24710 | 74353;74354;74355 | chr2:178536000;178535999;178535998 | chr2:179400727;179400726;179400725 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 1.0 | D | 0.87 | 0.618 | 0.68043841538 | gnomAD-4.0.0 | 1.44632E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.40142E-05 | 1.75796E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.6629 | likely_pathogenic | 0.7282 | pathogenic | -1.252 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
A/D | 0.9907 | likely_pathogenic | 0.9856 | pathogenic | -1.208 | Destabilizing | 1.0 | D | 0.87 | deleterious | D | 0.548940134 | None | None | N |
A/E | 0.9865 | likely_pathogenic | 0.9815 | pathogenic | -1.219 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
A/F | 0.932 | likely_pathogenic | 0.9187 | pathogenic | -1.12 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | N |
A/G | 0.492 | ambiguous | 0.4119 | ambiguous | -1.266 | Destabilizing | 0.998 | D | 0.657 | neutral | D | 0.530947533 | None | None | N |
A/H | 0.9897 | likely_pathogenic | 0.9876 | pathogenic | -1.377 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
A/I | 0.633 | likely_pathogenic | 0.7447 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
A/K | 0.9952 | likely_pathogenic | 0.9931 | pathogenic | -1.133 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
A/L | 0.7096 | likely_pathogenic | 0.7294 | pathogenic | -0.385 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
A/M | 0.7654 | likely_pathogenic | 0.8099 | pathogenic | -0.444 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
A/N | 0.9688 | likely_pathogenic | 0.9669 | pathogenic | -0.962 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
A/P | 0.9938 | likely_pathogenic | 0.9929 | pathogenic | -0.546 | Destabilizing | 1.0 | D | 0.864 | deleterious | D | 0.548940134 | None | None | N |
A/Q | 0.9733 | likely_pathogenic | 0.9661 | pathogenic | -1.105 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
A/R | 0.985 | likely_pathogenic | 0.9766 | pathogenic | -0.853 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
A/S | 0.3124 | likely_benign | 0.3486 | ambiguous | -1.391 | Destabilizing | 0.99 | D | 0.671 | neutral | N | 0.498866876 | None | None | N |
A/T | 0.3221 | likely_benign | 0.4152 | ambiguous | -1.295 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | D | 0.538257507 | None | None | N |
A/V | 0.2671 | likely_benign | 0.4042 | ambiguous | -0.546 | Destabilizing | 0.987 | D | 0.407 | neutral | D | 0.534310338 | None | None | N |
A/W | 0.9973 | likely_pathogenic | 0.9966 | pathogenic | -1.433 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
A/Y | 0.9824 | likely_pathogenic | 0.9778 | pathogenic | -1.014 | Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.