Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33585 | 100978;100979;100980 | chr2:178535994;178535993;178535992 | chr2:179400721;179400720;179400719 |
N2AB | 31944 | 96055;96056;96057 | chr2:178535994;178535993;178535992 | chr2:179400721;179400720;179400719 |
N2A | 31017 | 93274;93275;93276 | chr2:178535994;178535993;178535992 | chr2:179400721;179400720;179400719 |
N2B | 24520 | 73783;73784;73785 | chr2:178535994;178535993;178535992 | chr2:179400721;179400720;179400719 |
Novex-1 | 24645 | 74158;74159;74160 | chr2:178535994;178535993;178535992 | chr2:179400721;179400720;179400719 |
Novex-2 | 24712 | 74359;74360;74361 | chr2:178535994;178535993;178535992 | chr2:179400721;179400720;179400719 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/W | rs1411829466 | -2.053 | 1.0 | D | 0.837 | 0.826 | 0.902480430953 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 2.87687E-04 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9801 | likely_pathogenic | 0.9755 | pathogenic | -2.881 | Highly Destabilizing | 0.891 | D | 0.727 | prob.delet. | None | None | None | None | N |
L/C | 0.9704 | likely_pathogenic | 0.9704 | pathogenic | -2.419 | Highly Destabilizing | 0.998 | D | 0.767 | deleterious | None | None | None | None | N |
L/D | 0.9998 | likely_pathogenic | 0.9997 | pathogenic | -3.42 | Highly Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
L/E | 0.9985 | likely_pathogenic | 0.9974 | pathogenic | -3.156 | Highly Destabilizing | 0.999 | D | 0.845 | deleterious | None | None | None | None | N |
L/F | 0.8386 | likely_pathogenic | 0.806 | pathogenic | -1.762 | Destabilizing | 0.034 | N | 0.45 | neutral | D | 0.595680452 | None | None | N |
L/G | 0.9976 | likely_pathogenic | 0.996 | pathogenic | -3.472 | Highly Destabilizing | 0.966 | D | 0.833 | deleterious | None | None | None | None | N |
L/H | 0.9978 | likely_pathogenic | 0.9966 | pathogenic | -2.948 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
L/I | 0.1994 | likely_benign | 0.2049 | benign | -1.141 | Destabilizing | 0.175 | N | 0.64 | neutral | None | None | None | None | N |
L/K | 0.9975 | likely_pathogenic | 0.9951 | pathogenic | -2.249 | Highly Destabilizing | 0.963 | D | 0.814 | deleterious | None | None | None | None | N |
L/M | 0.4394 | ambiguous | 0.4284 | ambiguous | -1.269 | Destabilizing | 0.837 | D | 0.701 | prob.neutral | D | 0.596084061 | None | None | N |
L/N | 0.999 | likely_pathogenic | 0.9981 | pathogenic | -2.748 | Highly Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
L/P | 0.9989 | likely_pathogenic | 0.998 | pathogenic | -1.706 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/Q | 0.9952 | likely_pathogenic | 0.9916 | pathogenic | -2.548 | Highly Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | N |
L/R | 0.9944 | likely_pathogenic | 0.9897 | pathogenic | -2.006 | Highly Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
L/S | 0.9981 | likely_pathogenic | 0.9972 | pathogenic | -3.456 | Highly Destabilizing | 0.922 | D | 0.636 | neutral | D | 0.642163385 | None | None | N |
L/T | 0.9832 | likely_pathogenic | 0.9771 | pathogenic | -3.032 | Highly Destabilizing | 0.987 | D | 0.772 | deleterious | None | None | None | None | N |
L/V | 0.2544 | likely_benign | 0.28 | benign | -1.706 | Destabilizing | 0.004 | N | 0.365 | neutral | D | 0.550556525 | None | None | N |
L/W | 0.9919 | likely_pathogenic | 0.9878 | pathogenic | -2.177 | Highly Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.642163385 | None | None | N |
L/Y | 0.9944 | likely_pathogenic | 0.9926 | pathogenic | -1.933 | Destabilizing | 0.976 | D | 0.792 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.