Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 3360 | 10303;10304;10305 | chr2:178764213;178764212;178764211 | chr2:179628940;179628939;179628938 |
N2AB | 3360 | 10303;10304;10305 | chr2:178764213;178764212;178764211 | chr2:179628940;179628939;179628938 |
N2A | 3360 | 10303;10304;10305 | chr2:178764213;178764212;178764211 | chr2:179628940;179628939;179628938 |
N2B | 3314 | 10165;10166;10167 | chr2:178764213;178764212;178764211 | chr2:179628940;179628939;179628938 |
Novex-1 | 3314 | 10165;10166;10167 | chr2:178764213;178764212;178764211 | chr2:179628940;179628939;179628938 |
Novex-2 | 3314 | 10165;10166;10167 | chr2:178764213;178764212;178764211 | chr2:179628940;179628939;179628938 |
Novex-3 | 3360 | 10303;10304;10305 | chr2:178764213;178764212;178764211 | chr2:179628940;179628939;179628938 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | None | N | 0.24 | 0.112 | 0.151104730317 | gnomAD-4.0.0 | 6.84092E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99324E-07 | 0 | 0 |
Q/K | rs1259534996 | None | 0.012 | N | 0.245 | 0.123 | 0.199424873507 | gnomAD-3.1.2 | 1.31E-05 | None | None | None | None | N | None | 4.83E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
Q/K | rs1259534996 | None | 0.012 | N | 0.245 | 0.123 | 0.199424873507 | gnomAD-4.0.0 | 1.31427E-05 | None | None | None | None | N | None | 4.82625E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2427 | likely_benign | 0.2319 | benign | -0.34 | Destabilizing | 0.031 | N | 0.328 | neutral | None | None | None | None | N |
Q/C | 0.448 | ambiguous | 0.2829 | benign | 0.278 | Stabilizing | 0.864 | D | 0.373 | neutral | None | None | None | None | N |
Q/D | 0.4762 | ambiguous | 0.4123 | ambiguous | -0.181 | Destabilizing | 0.016 | N | 0.207 | neutral | None | None | None | None | N |
Q/E | 0.1079 | likely_benign | 0.1123 | benign | -0.205 | Destabilizing | None | N | 0.129 | neutral | N | 0.45741408 | None | None | N |
Q/F | 0.5103 | ambiguous | 0.4395 | ambiguous | -0.499 | Destabilizing | 0.356 | N | 0.401 | neutral | None | None | None | None | N |
Q/G | 0.2546 | likely_benign | 0.2023 | benign | -0.553 | Destabilizing | 0.072 | N | 0.359 | neutral | None | None | None | None | N |
Q/H | 0.1764 | likely_benign | 0.137 | benign | -0.563 | Destabilizing | None | N | 0.24 | neutral | N | 0.512666787 | None | None | N |
Q/I | 0.3226 | likely_benign | 0.3064 | benign | 0.138 | Stabilizing | 0.356 | N | 0.435 | neutral | None | None | None | None | N |
Q/K | 0.0797 | likely_benign | 0.0793 | benign | 0.025 | Stabilizing | 0.012 | N | 0.245 | neutral | N | 0.501628429 | None | None | N |
Q/L | 0.115 | likely_benign | 0.108 | benign | 0.138 | Stabilizing | 0.055 | N | 0.359 | neutral | D | 0.595097553 | None | None | N |
Q/M | 0.3098 | likely_benign | 0.2767 | benign | 0.619 | Stabilizing | 0.628 | D | 0.288 | neutral | None | None | None | None | N |
Q/N | 0.2855 | likely_benign | 0.2594 | benign | -0.274 | Destabilizing | 0.072 | N | 0.184 | neutral | None | None | None | None | N |
Q/P | 0.636 | likely_pathogenic | 0.624 | pathogenic | 0.007 | Stabilizing | 0.106 | N | 0.379 | neutral | D | 0.63476693 | None | None | N |
Q/R | 0.0736 | likely_benign | 0.0649 | benign | 0.188 | Stabilizing | None | N | 0.131 | neutral | N | 0.510554556 | None | None | N |
Q/S | 0.2405 | likely_benign | 0.2289 | benign | -0.297 | Destabilizing | 0.031 | N | 0.209 | neutral | None | None | None | None | N |
Q/T | 0.2266 | likely_benign | 0.2102 | benign | -0.162 | Destabilizing | 0.072 | N | 0.328 | neutral | None | None | None | None | N |
Q/V | 0.2451 | likely_benign | 0.2387 | benign | 0.007 | Stabilizing | 0.072 | N | 0.409 | neutral | None | None | None | None | N |
Q/W | 0.3545 | ambiguous | 0.2529 | benign | -0.431 | Destabilizing | 0.864 | D | 0.379 | neutral | None | None | None | None | N |
Q/Y | 0.3419 | ambiguous | 0.283 | benign | -0.19 | Destabilizing | 0.214 | N | 0.381 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.