Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33611 | 101056;101057;101058 | chr2:178535784;178535783;178535782 | chr2:179400511;179400510;179400509 |
N2AB | 31970 | 96133;96134;96135 | chr2:178535784;178535783;178535782 | chr2:179400511;179400510;179400509 |
N2A | 31043 | 93352;93353;93354 | chr2:178535784;178535783;178535782 | chr2:179400511;179400510;179400509 |
N2B | 24546 | 73861;73862;73863 | chr2:178535784;178535783;178535782 | chr2:179400511;179400510;179400509 |
Novex-1 | 24671 | 74236;74237;74238 | chr2:178535784;178535783;178535782 | chr2:179400511;179400510;179400509 |
Novex-2 | 24738 | 74437;74438;74439 | chr2:178535784;178535783;178535782 | chr2:179400511;179400510;179400509 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs769704328 | -0.271 | 0.992 | N | 0.593 | 0.255 | 0.231873229951 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
E/V | rs2154136906 | None | 0.994 | N | 0.707 | 0.447 | 0.303781844768 | gnomAD-4.0.0 | 1.59318E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43295E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.6656 | likely_pathogenic | 0.4978 | ambiguous | -0.667 | Destabilizing | 0.965 | D | 0.532 | neutral | N | 0.503138416 | None | None | N |
E/C | 0.9899 | likely_pathogenic | 0.9727 | pathogenic | -0.209 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
E/D | 0.2919 | likely_benign | 0.2125 | benign | -0.547 | Destabilizing | 0.002 | N | 0.183 | neutral | N | 0.441183093 | None | None | N |
E/F | 0.9909 | likely_pathogenic | 0.9719 | pathogenic | -0.243 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
E/G | 0.7091 | likely_pathogenic | 0.5335 | ambiguous | -0.937 | Destabilizing | 0.989 | D | 0.559 | neutral | N | 0.463849309 | None | None | N |
E/H | 0.9408 | likely_pathogenic | 0.8556 | pathogenic | -0.132 | Destabilizing | 0.999 | D | 0.624 | neutral | None | None | None | None | N |
E/I | 0.9602 | likely_pathogenic | 0.9061 | pathogenic | 0.039 | Stabilizing | 0.997 | D | 0.795 | deleterious | None | None | None | None | N |
E/K | 0.7142 | likely_pathogenic | 0.5131 | ambiguous | 0.155 | Stabilizing | 0.981 | D | 0.482 | neutral | N | 0.481800352 | None | None | N |
E/L | 0.961 | likely_pathogenic | 0.8998 | pathogenic | 0.039 | Stabilizing | 0.997 | D | 0.762 | deleterious | None | None | None | None | N |
E/M | 0.9322 | likely_pathogenic | 0.8536 | pathogenic | 0.239 | Stabilizing | 0.996 | D | 0.724 | prob.delet. | None | None | None | None | N |
E/N | 0.7081 | likely_pathogenic | 0.5187 | ambiguous | -0.415 | Destabilizing | 0.962 | D | 0.601 | neutral | None | None | None | None | N |
E/P | 0.9972 | likely_pathogenic | 0.9926 | pathogenic | -0.176 | Destabilizing | 0.98 | D | 0.657 | neutral | None | None | None | None | N |
E/Q | 0.5072 | ambiguous | 0.3522 | ambiguous | -0.331 | Destabilizing | 0.992 | D | 0.593 | neutral | N | 0.481280277 | None | None | N |
E/R | 0.8599 | likely_pathogenic | 0.7122 | pathogenic | 0.421 | Stabilizing | 0.996 | D | 0.645 | neutral | None | None | None | None | N |
E/S | 0.6803 | likely_pathogenic | 0.4843 | ambiguous | -0.585 | Destabilizing | 0.947 | D | 0.491 | neutral | None | None | None | None | N |
E/T | 0.803 | likely_pathogenic | 0.644 | pathogenic | -0.353 | Destabilizing | 0.994 | D | 0.606 | neutral | None | None | None | None | N |
E/V | 0.8651 | likely_pathogenic | 0.7527 | pathogenic | -0.176 | Destabilizing | 0.994 | D | 0.707 | prob.neutral | N | 0.46842168 | None | None | N |
E/W | 0.9976 | likely_pathogenic | 0.992 | pathogenic | 0.036 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
E/Y | 0.9791 | likely_pathogenic | 0.9428 | pathogenic | 0.034 | Stabilizing | 1.0 | D | 0.735 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.