Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 33612 | 101059;101060;101061 | chr2:178535781;178535780;178535779 | chr2:179400508;179400507;179400506 |
N2AB | 31971 | 96136;96137;96138 | chr2:178535781;178535780;178535779 | chr2:179400508;179400507;179400506 |
N2A | 31044 | 93355;93356;93357 | chr2:178535781;178535780;178535779 | chr2:179400508;179400507;179400506 |
N2B | 24547 | 73864;73865;73866 | chr2:178535781;178535780;178535779 | chr2:179400508;179400507;179400506 |
Novex-1 | 24672 | 74239;74240;74241 | chr2:178535781;178535780;178535779 | chr2:179400508;179400507;179400506 |
Novex-2 | 24739 | 74440;74441;74442 | chr2:178535781;178535780;178535779 | chr2:179400508;179400507;179400506 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.545 | N | 0.391 | 0.136 | 0.388334884743 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3699 | ambiguous | 0.1866 | benign | -0.818 | Destabilizing | 0.001 | N | 0.108 | neutral | N | 0.448703711 | None | None | N |
V/C | 0.9103 | likely_pathogenic | 0.8072 | pathogenic | -0.821 | Destabilizing | 0.962 | D | 0.385 | neutral | None | None | None | None | N |
V/D | 0.6799 | likely_pathogenic | 0.3849 | ambiguous | -0.378 | Destabilizing | 0.54 | D | 0.415 | neutral | None | None | None | None | N |
V/E | 0.5984 | likely_pathogenic | 0.33 | benign | -0.444 | Destabilizing | 0.222 | N | 0.357 | neutral | N | 0.427808364 | None | None | N |
V/F | 0.4443 | ambiguous | 0.2388 | benign | -0.731 | Destabilizing | 0.861 | D | 0.405 | neutral | None | None | None | None | N |
V/G | 0.4997 | ambiguous | 0.2794 | benign | -1.032 | Destabilizing | 0.545 | D | 0.391 | neutral | N | 0.486491308 | None | None | N |
V/H | 0.8395 | likely_pathogenic | 0.6202 | pathogenic | -0.465 | Destabilizing | 0.009 | N | 0.353 | neutral | None | None | None | None | N |
V/I | 0.1047 | likely_benign | 0.0856 | benign | -0.38 | Destabilizing | None | N | 0.171 | neutral | None | None | None | None | N |
V/K | 0.7019 | likely_pathogenic | 0.3951 | ambiguous | -0.715 | Destabilizing | 0.293 | N | 0.355 | neutral | None | None | None | None | N |
V/L | 0.4911 | ambiguous | 0.2907 | benign | -0.38 | Destabilizing | 0.023 | N | 0.301 | neutral | N | 0.486491308 | None | None | N |
V/M | 0.284 | likely_benign | 0.1669 | benign | -0.437 | Destabilizing | 0.77 | D | 0.371 | neutral | N | 0.505597144 | None | None | N |
V/N | 0.4482 | ambiguous | 0.2294 | benign | -0.514 | Destabilizing | 0.002 | N | 0.32 | neutral | None | None | None | None | N |
V/P | 0.7377 | likely_pathogenic | 0.5195 | ambiguous | -0.489 | Destabilizing | 0.466 | N | 0.405 | neutral | None | None | None | None | N |
V/Q | 0.6226 | likely_pathogenic | 0.3824 | ambiguous | -0.712 | Destabilizing | 0.673 | D | 0.406 | neutral | None | None | None | None | N |
V/R | 0.6566 | likely_pathogenic | 0.3704 | ambiguous | -0.183 | Destabilizing | 0.005 | N | 0.336 | neutral | None | None | None | None | N |
V/S | 0.4593 | ambiguous | 0.2272 | benign | -0.984 | Destabilizing | 0.323 | N | 0.347 | neutral | None | None | None | None | N |
V/T | 0.3067 | likely_benign | 0.1647 | benign | -0.938 | Destabilizing | 0.277 | N | 0.187 | neutral | None | None | None | None | N |
V/W | 0.9561 | likely_pathogenic | 0.8722 | pathogenic | -0.821 | Destabilizing | 0.997 | D | 0.485 | neutral | None | None | None | None | N |
V/Y | 0.8342 | likely_pathogenic | 0.6379 | pathogenic | -0.536 | Destabilizing | 0.861 | D | 0.412 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.